| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3782 |
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| Symbol | |
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| ID | 8884982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4037007 |
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| End bp | 4039955 |
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| Gene Length | 2949 bp |
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| Protein Length | 982 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003512532 |
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| Protein GI | 291301254 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.519842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00738187 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTACTC AAGGCGATGA ACCGCTGATC CGGTTGCTCG GTGACGTGTC GATCGTCGTC
AACGGTGAGC CGGTCTCGGC GGGTACGCCG AAGCAGGCGT GTGTGTTGGC GTGTCTGGCC
TGGACGCCGG GTACGCCGGT GGACACTGAC ACGATCATCG AGCGGGTCTG GGACGGTGAC
GCCCCCGCCA ATCCGCGTAA TACCTTGTCG CCGTATGTGA CCCGGCTGCG TTCCCTCCTG
TCCGACACGG GCGCGACCAT CACCGGTAAG AGCGGTACCT ACACCCTCAA CGTCGCCGAC
ACCGACGTCG ACGTCCACGC CATGCGAACC CTCGCCGCCC GCGCCCGCGA CGTCCCCGCC
CACCACCCCG ACGCGATCAG CCTGCGCCGC AAGGCATTGC GGCTGTGGCG CGGCTCGCCG
CTGTCGCGCG TCGACTGCCG CTGGGCCGAC GCGATCTCGG TGACCCTCGA ACCCGAACAC
GTCAGCCTGT GGACCGACCT GTTCGACGCG GAACTGGCCC AGGGCAACCA CGCCACCATC
CTGGGAGAAC TGTCGCAGCT TCACAACCGC CATCCCGACA ACGAGAACCT CATCGGACAG
TACATGGTGG CGCTGTACCG GTGCGGACGC GGCGTGGAGG CCCTGGAGAC GTTCCGGCGC
ACCGATTCCC GGTTCCGCCG CGAGTTCGGC ATCGACGCGT CGCGGCGGCT GGCCGAACTA
CAGCGCCGCA TCCTCGCCGA CGATCCGTCC CTGTCGGACA CCGCCGCCGC CAAGACCAGC
ACCGAACCCG TCCCGGCGCA GCTGCCCGAG CCGCCGCCGG GCTTCGTGGG CCGCAGTGCC
GAACTGCGCG CCGCCGACGA CCAGGTGGCG CGGGGACGGC GCGCGGTGGC GTTCGTCGGT
CCCGGCGGCA TGGGCAAGAC CTCGCTGGCC CTGTGGTGGG CGCATCGCGT CGCCGCCGAT
TTCGCCGACG GCCAGCTGTT CGCCGACCTG CGCGGCTACT CCGGCGAGGA ACCGGTACCG
ACATCCCGGA TCCTGGCCGG ATTCCTGCGA GCCCTTGGCC ACAACGACTC CGACCTGCCC
ACAGGGGAGT CGGAGCTGGC GGGCATGTAC CGCACGGCGC TGGCCAAGAA GAACGTCCTC
ATCGTGCTGG ACAACGCCGC CGGCCCCGCG CAGGTCCGGC CACTGCTGCC CGGCGACGGC
AACTGCCTGG CCGTCCTCAC CAGCCGCGAC GACCTGCGCG GCCTCAAAGT CGACCACGAC
GTGGCCACCA TCGGCGTCGG CGAACTGTCC ACACCCGACG CGGTGGCGAT CCTGTCGGCC
CACGTCACCG CCGCCCCCGA GGCCCGCGAC CAGCTGGAGC GACTGGCGGA ACTGTGCGGC
CACCTGCCGC TGGCGATCCG GCTGGCCGCC AGTCGCCTGC CCTCCGGTTC GGCCGAGGAA
CTGTCCGCAC TGGTCACCGA CCTGGAGTCC GGCGACCGGC TGGCGACCCT GTCGCGGCCC
GGCGAGACCG TCGGCGGCCT GGCCGCCACC ATCGAGTCCT CCTACCGCCG ACTGGATCCC
GCCGCCCGCG AGGTCTTCGA ACTGCTGGGC GCCCACCCCA GCGGCGAGGC CGACGCGGCG
GCACTGGCCA ACGCCGTGGG CCGTCCGGTC GCGCAGGTGA ACCGCAGCCT GCGGCGCCTG
GAGGCCGCCC ACCTCGCGCA CCGGGTCGAG TCCCGTTGGG GCGTCCACGA TCTGGTCAAG
GAGTTCGCGG CCCGCGCGGC CGGTGACGTC GGTGACCGGC TGGGCCGCCT GTACGACTGG
TACGCGATGG GCGTCCTGGG CGCCGACGGC CACATCTACG GTCCCCGGCC GCAACTGCGG
GTCGACACGA CCGTCCCGCC GCCGGAGTTC GACGGCGCGG GCGAGGCCGA CGCCTGGGTG
GAGCCGCGCG TCGACGTGTT CCTGGCCGCG ATCGACCAGG CCGCCGCGCG GCACCGCGAC
CAGGCGCTGC GACTGGTGAC AGGACTGTGG CGGTACCTGT GGCGGCGCGG CATGTACGAC
GCCTGGATCA CCGCCCAGCA CACCGTTCTG GACGCGTTCG GCGAGGACGC CGACGCGCGG
GTGCGCTGCC AGCTGCTGAT GGGCCTCGGC AACGCCTACA ACTGCGCCGG ACGGCACGAC
AAGGGCGCCG GGCACATCCG CGCCGCCTAC GACCTGGCCC AGGACCTGGA CGTGGAGGAA
CGCGCCAAGA CCGCCGGGGC CCTGGGGGTG CTGTTGAGCG ACTGCGGTTC CAGCCGCGAG
GCACGGTCCT ATCTGGAACA GGCCCGGGAC CTGTACGCCA AGGCCGCGGT GCCCGGCCGG
GTGGCGGTGT CGCAGTACGA ACTGGGACGG CTGGACTACC GCGACGAGGT CTTCGCCGAC
GCCCTGGACC GGTTCGCCGA GGCGGTGGCG GTGTGGGAGT CGCTGGCCCC GGGTTCGGTC
GCGATCGGGC TGACCAGCCT GGGCCGCACC CAGGCGCGAC TGGGACGGCT GGCCGAGGCC
GCGACCACTC TGGAGCGCGC GGTGGCGGCG GCCCGCGACC TGTCGCACCC GTCGGTGGAG
AGCTACGCGC TGAGCATCCT GGCGATCGTG CTGCACCGCA ACGGCAGTAC CCGGGCGGGC
TGGCGACGGC ACCGGGAGGC GATCGCGTTG ACGCCCCGGG TCACCCACGC CGACCTGCGC
GTCGAGATCC ACAACTTCGC CGGGGTGTTC CGCGCCCAGG CCGAGCAGCC CGAGGCCGCG
ATCGAGTACC ACCACGTCGC GCTGGCACTG GCCGAGGAGG CCGACGCCGG ATACGAGAAG
GCCCGGGCCC ACCAGGGACT CGCCGACGCC TACGCCGCGC GGGACGACGC CGAGGCGGCG
GCACACCGGC GGGCCGCGGC GGCCGGATTC GCGCTGGCAC AGACCCCGCC GCCGAGCGAC
CTGCTGTGA
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| Protein sequence | MLTQGDEPLI RLLGDVSIVV NGEPVSAGTP KQACVLACLA WTPGTPVDTD TIIERVWDGD
APANPRNTLS PYVTRLRSLL SDTGATITGK SGTYTLNVAD TDVDVHAMRT LAARARDVPA
HHPDAISLRR KALRLWRGSP LSRVDCRWAD AISVTLEPEH VSLWTDLFDA ELAQGNHATI
LGELSQLHNR HPDNENLIGQ YMVALYRCGR GVEALETFRR TDSRFRREFG IDASRRLAEL
QRRILADDPS LSDTAAAKTS TEPVPAQLPE PPPGFVGRSA ELRAADDQVA RGRRAVAFVG
PGGMGKTSLA LWWAHRVAAD FADGQLFADL RGYSGEEPVP TSRILAGFLR ALGHNDSDLP
TGESELAGMY RTALAKKNVL IVLDNAAGPA QVRPLLPGDG NCLAVLTSRD DLRGLKVDHD
VATIGVGELS TPDAVAILSA HVTAAPEARD QLERLAELCG HLPLAIRLAA SRLPSGSAEE
LSALVTDLES GDRLATLSRP GETVGGLAAT IESSYRRLDP AAREVFELLG AHPSGEADAA
ALANAVGRPV AQVNRSLRRL EAAHLAHRVE SRWGVHDLVK EFAARAAGDV GDRLGRLYDW
YAMGVLGADG HIYGPRPQLR VDTTVPPPEF DGAGEADAWV EPRVDVFLAA IDQAAARHRD
QALRLVTGLW RYLWRRGMYD AWITAQHTVL DAFGEDADAR VRCQLLMGLG NAYNCAGRHD
KGAGHIRAAY DLAQDLDVEE RAKTAGALGV LLSDCGSSRE ARSYLEQARD LYAKAAVPGR
VAVSQYELGR LDYRDEVFAD ALDRFAEAVA VWESLAPGSV AIGLTSLGRT QARLGRLAEA
ATTLERAVAA ARDLSHPSVE SYALSILAIV LHRNGSTRAG WRRHREAIAL TPRVTHADLR
VEIHNFAGVF RAQAEQPEAA IEYHHVALAL AEEADAGYEK ARAHQGLADA YAARDDAEAA
AHRRAAAAGF ALAQTPPPSD LL
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