Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3745 |
Symbol | |
ID | 8884944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3992211 |
End bp | 3992918 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003512495 |
Protein GI | 291301217 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.627677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.255424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTGAAC CGATCCGTGT CCTGGTCGCC GACGACCACC CGATCGTGCG GCAGGGCCTG AAGACCTTTC TGGACATCCA GCCCGACCTG TCGGTCGTGG CCGAGGCCCG CGACGGCGAC GAGGCGCTTG CCCTCATCGC CGCCCACGAA CCCGACGTGG TGCTGCTGGA CCTCAACATG CCCGGCTCCG ACGGCGCCAA GGTGCTGACC CGGCTGGCCG CCTCCGACCA CCGCGCGAAG GTGATCGTGC TGACCTCGGT CACCGAGGCC GTCCGGGTCA CCGAGGCCGT GGCGGCCGGA GCCGCCGGAT TCCTGTACAA GGACATCGAT CCCGACTCGC TGGCCCAGGC GATCCGCTCG GTCGCCGACG GCCAGGTGAT CTTCGCCCGC GAGGCCGTCA CCGCCATGAC CGCCCCCGCG CCGGGCCCGG TCGCCGCGCT GACCGCCCGG GAACGCGAGG TCCTGGCCCT GGTGGCCGCG GGCCGCTCCA ACCGGGAGAT CGCCAAACAG CTGTCGGTGG CCGAGAAGAC CGTCAAGACC CACCTGTCGA GCCTGTTTCG CAAACTCGGC GTCGCCGACC GGACCCAGGC CGCGCTGTAC GCCGTCACAC ACGGCATGGC AGGCCACACC GAGGGCCGGT TAGAATCCCC GCCCAGAGCG GGACGACAAT CAGCAGTCCA TAAGAGAAGA GTCTGGGAGG CGCGGTGA
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Protein sequence | MSEPIRVLVA DDHPIVRQGL KTFLDIQPDL SVVAEARDGD EALALIAAHE PDVVLLDLNM PGSDGAKVLT RLAASDHRAK VIVLTSVTEA VRVTEAVAAG AAGFLYKDID PDSLAQAIRS VADGQVIFAR EAVTAMTAPA PGPVAALTAR EREVLALVAA GRSNREIAKQ LSVAEKTVKT HLSSLFRKLG VADRTQAALY AVTHGMAGHT EGRLESPPRA GRQSAVHKRR VWEAR
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