Gene Snas_3727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3727 
Symbol 
ID8884926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3971360 
End bp3972871 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512477 
Protein GI291301199 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0286482 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCTG GCCCATTGAG TACCCGAGTC GCCGCCTTGT GCGCCGAACT GTCGCCCCGC 
CTGTCTCCCC GGTCGCGCGC CGAGGTCGAC GGTGTCAGAG CTCGTATCGG CCAGCCGTTG
CGGGTGGCCA TCGCCGGACG CCTCAAAGCG GGTAAGTCCA CTCTCGTCAA CGCGTTGATC
GGACGGCGGG TCGCCCCCAC CGAGGTCGGC GAGTGTACCC GCCTGGTCAC CCAGTTCCGT
TACGGCACCT CCGACCGGGT CGACGTCGTC AAACGCGACG GCACCCGCGT CAGCCTGCCC
CTCGACGACG CCGGAATGGT CCCGCAGAAA CTCAACGTCC CCCGCGAACA GGTCGCCTAC
GTCGACGTCA CCCTGACCTC CGACCGGCTG GAGAACCTGA CGGTCGTGGA CACCCCGGGC
ATGTCCTCGG TGAACACCTC GATCTCCAAC GAGGCCAACA AGTTCCTGTT CGACGCGCCC
ATCGCCGACG ACATCGACCC CGACTCGCAG TCGGCGCTGT CGGGCGCCGA GGCCATCATC
TACACCTTCA CCCAGTCGGT GCGCGAGGAC GACCTGCAGG CGCTGGAGGC GTTTCGCACC
ATGTCGTCGC GGCTGTCGTC CAACCCGATC AACTCGCTGG GCCTGTTCAA CAAGGTCGAC
AAGCTGGCAC CCACCCCCTC GGGCGACCCG TGGCCGGTGG CCGAGCCGCT GTCGCGCTCC
CAGTCGCAAC TGATGCGCCG CGTCGTGTCC GACGTGGTCC CCGTCGTTGG GCTGTTGGCC
GAGACCACCG AGGCCGGACG GCTCACCGCC GCCGACTGCG AGGCGCTGCG CAAACTCGCC
GAGCTGCCGC AGGAGGAACG CACCGTGCTG TTGGCCGCGG CGTCGCTGTT CTCCACCCGC
GAATGCCCCG TCTCGCCCGA GCAGCGCGAA CGGCTGCTGC GGCTGTTGGA CCTGTACGGC
ATCAACTTCG CCATCGCGCA CCTGGTGGCC AACCCGTCGA TGGCCACCGG TGAACTGGTG
CGGCTGCTGT TCGCCGCCTC CGGGTTCCCC CGGCTGCGCC AGACACTGGA GCAGGCTTTC
CGGCTGCGCT CCGACGCCAT CAAGGCCGGT TGGGGCCTGG CCCGGCTGGA GACGCTGGCC
TCCACGACCG CCTCCCCGCA GGAGCGGGAG ATGCTGCGCG ACGCCATCGA ACGCGTCATC
CAGGACCCGC AGTACCACCG GCTGCGGCTC ATCGAGGTGG CCGCCCAGGT CACCACCGGC
ACCGTCGAGC TGCCCTCCGA CATGGAATCC GAGATCGCCC GGCTGGCGTT GTCCTCCGAG
CCGTCCCACG TGCTGGGTCT TCCTGCCAAT GACCACGAAG CACTGGTCAA GGCGGCTCTG
GCGGCCAATA ATCGCTGGAG GGCGTTCGCG GTGGGTGGGG CCTCCCCCGC CCAGGCGCGC
GTCGCGCACG TCGTGGCCCG CGGTTTCCAC CTGCTGGCCC AGCAACTTCG TTCACCCCGC
ACCGCCCACT GA
 
Protein sequence
MASGPLSTRV AALCAELSPR LSPRSRAEVD GVRARIGQPL RVAIAGRLKA GKSTLVNALI 
GRRVAPTEVG ECTRLVTQFR YGTSDRVDVV KRDGTRVSLP LDDAGMVPQK LNVPREQVAY
VDVTLTSDRL ENLTVVDTPG MSSVNTSISN EANKFLFDAP IADDIDPDSQ SALSGAEAII
YTFTQSVRED DLQALEAFRT MSSRLSSNPI NSLGLFNKVD KLAPTPSGDP WPVAEPLSRS
QSQLMRRVVS DVVPVVGLLA ETTEAGRLTA ADCEALRKLA ELPQEERTVL LAAASLFSTR
ECPVSPEQRE RLLRLLDLYG INFAIAHLVA NPSMATGELV RLLFAASGFP RLRQTLEQAF
RLRSDAIKAG WGLARLETLA STTASPQERE MLRDAIERVI QDPQYHRLRL IEVAAQVTTG
TVELPSDMES EIARLALSSE PSHVLGLPAN DHEALVKAAL AANNRWRAFA VGGASPAQAR
VAHVVARGFH LLAQQLRSPR TAH