| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3591 |
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| Symbol | |
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| ID | 8884790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3813477 |
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| End bp | 3816314 |
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| Gene Length | 2838 bp |
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| Protein Length | 945 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | RNA polymerase sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003512344 |
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| Protein GI | 291301066 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCA CGACGGCGAT GATCCGCATC GAGCCGCTGG TTCGATGGCC CCGCCACATG
ACCTCTGGAC AGGCGCACCT GGTTGAGGTC GATCTACGGC TGCTCGACGA GCACTGGCCA
TATGAGAACG AGGAGTTCAC GTTCCACGTC CTGCTGGCGG GGATGCCGTT CCACGAGGTG
CGCACCGTCG GCCCGCCCGA GATCGTCGTG CACCGCTTCG GAGGGTCGTA CGGATCATGC
CGATTCGTGG TGACACCGAC CGTGGCGTCC GGTGATCATC CATTGGCGCT GAGCTTGGAG
ACCGACGGCG GCGCGCACGT GACGACGATC GAGCTGCCCG TCCACGTCGC CGCCGAGACA
CGCGACGAAG TGCGCGAAGC CGTGGTGCCG GCGGCGGGGC GGTCCGGGCG TGCGGAGCAT
CGGGCGAACC CGGCGGTGAC GGCGCGAAGT GTCGTGCCGT TGCTGGCGGC GCATATCGGT
CCGGACTTCT CGACGGACGC CGTCGCGGCG GTGGCCGGGG TCGATTTGCC GACGGCGGGC
CGTTTGCTGG CGGAGCTAGC CGCCGACGGC AGCGTCGATG AGTCGCGAGA CGCACGATAC
TCGCTGTCCC CCAAGGGGCG CGGACGAATC GAGACAACAC CGGCCGACCT GCGTGACGCG
GCCCGGCGGC GTCTGCTCGA CCACTATCGG CAGACCGGCC AGTTGGCGTT GGAGATCATG
GCCCCGCGTG GGGTGTCGGT CGTCCAGGGT GTGATCGGGT TCCGTGACCG CTCCGCCGCC
CGGGACTGGC TCGATGAAGA GACATCCAAT ATGGCGGCGT ATGCGTCGCT GGCCGCGGAG
AACGGCTGGA TGGAGCACGC CCGGGAACTG CTGCAGGTGC TGTCTCAGCA CCTGCTCGAC
ACCGGTCACC ACGAGACATT CTTTCGTCTG TGCCGCCGTA TGGCCAACGC CTCAGATCAT
GAGGTGAAAG ATTTGGCGCT CAACGAACTC GCCGACACCT ACCTGGAACT GGGCCGCTAC
CTCGAAGCGA TGGAGTGCCT GAACCGAGTA CGGGAACTGG AAGCGTCATC TGCCGGAATC
GCCGGACACG CTGAAGCCCT GAACAAACTC GGGGTCGTGC ATTCGCGACT GGGACAGCAC
GAACGTGCGT ATGAGTTTCA CCAGCGGGCT CTGGAGTTCG CCCGCGGGAC TGAGAACCGC
CTGTTGATCG TGGACACATG CGTGCAGCTG GGCATTTCGC TCGTGTCGCA GGGCAGGCTC
CAAGAGGCAC TGGCGCGTTT CGCTCATGCC CGAGACCTGA GCGAAGAGCT CAACGACCAG
TACCGGGTCG CCTTGTCCAC GGAACACCTG GCCCAGGTCC ACGCCGCCCT CGGTAACGTT
GACAATGGGC GGGAACTGTG GGCAGAGGCG GCACAACGGT ATCGGTCGCT GGCGCGACCG
CCGACCGACA CGTCACGATC GGACACGGAA CCCGTTCCCG GTGTGGCGGG ACGGGTCTCG
GACGAAAGGC GGCTTACCGA GGCGATCGAG CAGCTGGCCA GTGGTCGCCG CGCGGAACAG
GATGTCGGGA TTCAGACCTT GGAAACCCTG GCTCGGCAGG TGAAACAGCT GCGGCAGACC
GCCGTGGACG AGCTTTGCCG ATATGTCCGC GAGTTTTCGG AGCGCGAGAC CAACACGGCG
AAGTCCTCGC ACCACGGTAG GGTTCGCCAC GTCCTCGACA TTCTGGTGGA TCTGTCGCAC
GCAACCGACG CGAACGTGGA GCCGACCAAC ATCGACCTCA GTGGCGCGGT CCTGCCGCAG
GTCGACTTCA CTGACTGCCG ATTCGGCTAC GCCAGTTTCA ACCGGGCGGT ATTCACGCGG
CAGGCCAACT TCACCAATGT GGTCTTCGAC GGACCGGCGC AGTTCAGCGA CACGATGTTC
GAGTTCCCCG ACGCCGGGTC AGCTGTGTTC ACCTCGGCGA AGTTCCAGGG AGCGGCGGAC
TTCAGCAGGG CCGAGTTCAA CGGCAGAGCC TCGTTTCTCT CGGTGAGTTT CCTCGACGAA
GTGATATTCC GTGACGCGAA CTTCATGGCG GCCGCGCTCT TCACCGGCGG GAGCGGACAC
GGTGCCGTGC GCTTTGATGA CGTGATAATC GCGGAACCCG AATCCCTGCG GTTGGAGGAC
TTCGAGGTAC TCCAGCCGTC CGCCGCCCAC CGCTGGCCAG TTGGTTGGAG CCCGTACACC
ACCGCCAACG AAGGACTGTC GCTGCGGCGG GCCCCCGAAG CGGGAGTAAG CCGGGCCGAC
GAACGCCTGG CGCTCGCGTT GGCCCACATG GGTGAACCGG ACGCGCTGGA CGAAGTTATA
GCCGAGTATT CGCCCCTAGT GTGGCGAGTG GCCCGGGGTC AGGGGCTCGA TCGCTCCATG
GCAGAGGACG TCGTACAGGC CACCTGGATG CGGCTGGTGC AAAGCCTGCC GCGCGACGTC
CAAAACCTCA AGAACCTGCA GGGTTGGCTC ACGAGCAGCG CCAAGCGCGA AGCATGGAAA
CGAGCCCGGC AAGCGAGATT GGAGATCCCC AGTAGCCTGG AGTGGTTCGA GGACCTGCGC
AGTTCGGAGA ACGTCGAAGA CGATGTGGCG GACCGGATGA ACACGGCCCC CCGGTACCAG
GCTATTTGGG CAGCACTCAA CCAGATGTCG GACGTGTGCC GGGCGCTCAT CCAGGTCATC
GCCTACACAG ACCGACCCGA CTATGACGCG GTCGCGCGGC AACTCGGTAT AGCGAGAGGT
TCCATCGGCC CCACACGCGG CCGGTGCCTC GCGCACCTGC GACGGCTGTT GCAGGAGAAC
TCGGACTTCA ATGACTGA
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| Protein sequence | MTSTTAMIRI EPLVRWPRHM TSGQAHLVEV DLRLLDEHWP YENEEFTFHV LLAGMPFHEV
RTVGPPEIVV HRFGGSYGSC RFVVTPTVAS GDHPLALSLE TDGGAHVTTI ELPVHVAAET
RDEVREAVVP AAGRSGRAEH RANPAVTARS VVPLLAAHIG PDFSTDAVAA VAGVDLPTAG
RLLAELAADG SVDESRDARY SLSPKGRGRI ETTPADLRDA ARRRLLDHYR QTGQLALEIM
APRGVSVVQG VIGFRDRSAA RDWLDEETSN MAAYASLAAE NGWMEHAREL LQVLSQHLLD
TGHHETFFRL CRRMANASDH EVKDLALNEL ADTYLELGRY LEAMECLNRV RELEASSAGI
AGHAEALNKL GVVHSRLGQH ERAYEFHQRA LEFARGTENR LLIVDTCVQL GISLVSQGRL
QEALARFAHA RDLSEELNDQ YRVALSTEHL AQVHAALGNV DNGRELWAEA AQRYRSLARP
PTDTSRSDTE PVPGVAGRVS DERRLTEAIE QLASGRRAEQ DVGIQTLETL ARQVKQLRQT
AVDELCRYVR EFSERETNTA KSSHHGRVRH VLDILVDLSH ATDANVEPTN IDLSGAVLPQ
VDFTDCRFGY ASFNRAVFTR QANFTNVVFD GPAQFSDTMF EFPDAGSAVF TSAKFQGAAD
FSRAEFNGRA SFLSVSFLDE VIFRDANFMA AALFTGGSGH GAVRFDDVII AEPESLRLED
FEVLQPSAAH RWPVGWSPYT TANEGLSLRR APEAGVSRAD ERLALALAHM GEPDALDEVI
AEYSPLVWRV ARGQGLDRSM AEDVVQATWM RLVQSLPRDV QNLKNLQGWL TSSAKREAWK
RARQARLEIP SSLEWFEDLR SSENVEDDVA DRMNTAPRYQ AIWAALNQMS DVCRALIQVI
AYTDRPDYDA VARQLGIARG SIGPTRGRCL AHLRRLLQEN SDFND
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