Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3583 |
Symbol | |
ID | 8884782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3800254 |
End bp | 3803475 |
Gene Length | 3222 bp |
Protein Length | 1073 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | DNA polymerase III subunit alpha |
Protein accession | YP_003512337 |
Protein GI | 291301059 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGAAGC CCCGGCATCT GCGACTGGTC ACCGACGACG AACCCACGCC GCCAGCCTCA TCTCCACCGG CTGTCGAGGC CGGTGGTTAT GCCGAGCTGC ACGCCCACTC GAATTTCTCG TTCCTGGACG GCGCGTCCTC GCCGGAGGAT CTGGTGGCCG AAGCGCTTCG CCTGGGTCTA TCGGGGCTGG CGATCACCGA CCATGACGGC TTGTATGGGG CGGTGCGGTT CGCCCAAGCC GCGAAAGGCA CCGGCCTGGC CACGGTGTAC GGCGCCGAGC TGTCCATCGG GTTGACCGGT GAGCGGGCGG GTGTGCCGGA TCCGTCGGGT ACGCACCTGC TGGTCCTGGC CCGCGGTGCC GAGGGGTACG CGAAGCTGTC GGCGGCGATC GGCAACGCCC ACCTGGCCGG TGGCCAGAAA GGTCTGCCCG ACTACGGGAG CCTGGAGGGC GTCGCCGCGA GGCTGCGCGG GCACGTGGTG GTGTTGACTG GCTGCCGCAA GGGCCCGGTA CGCCGTGCCT TGGATGCGGG TGGGGTGGAT GCGGCGCGGG TCGAGTTGGA GCGGTTGGTT GAGTTGTTCG GGCGCGACGG CGTTTACGTC GAGTTGACTG ACCATCAGGC TTTCACCGAC GGCGACCGCA ACGAGGCGCT CGCCGATCTG GCTTCCGAGT TGGGGCTGTC GGTGGTGGCG ACAAACAACG TCCATTATGC CCGCAGCTCT CGGCACAGGT TGTCGCAGGT GGCCGCGGCG GTGCGCGCCA ACATGCCCCT GGACGAGCTG GACGGGTGGC TGCCCGCCGC ACCAACGGCA CGGCTGTGCT CGCCTGACGA GATGGTCGAG CGGTTCGCGC CGTTTGGCGG CGCGGTGGCC AGCAGCCTCC GTCTCGCAAG GGAGTTGGCG TTCGACCTGG ACCTAGTGGC GCCCGCGTTG CCGCCGTTTC CGGTCCCGGC CGGGCATGAC GAGGACTCCT GGCTGCGGCA CCTGGTCCAG GCCGGTGCGG CCGAGCGGTA TGGGCCCTTG GGATCGCGCT CGGACGTGGT CCGGCAACTG GATCATGAAC TTGATGTCAT CAAGAGGCTC GGGTTCGCGG GTTACTTCCT CATCGTCCAC GACATTGTGG ACTACTGTCG CCGGGAGGGG ATCCTGGTCC AGGGCCGCGG CAGCGCGGCC AACTCCGTGG TGTGTTTCAC CCTGGGGATC ACCGCGGCCG ACCCGATCGC ATTCAAGCTG TTGTTCGAGC GGTTCCTCAG CCCCGCTCGG GAGGGGCCAC CGGACATTGA CCTGGATATC GAGGCGCGGC GCCGCGAAGC CGTCATCCAA TACGTCTACG ACACCTACGG CCGCACCTAT GCCGCCCAGG TCGCCAACGT CATCACCTAC CGCCGCCGCT CCGCCATCAG GGACTCGGCC GCTGCTTTGG GGTATTCGCC CGGCCAGGTG GATGCCTGGA TCGCGGCCTC CCCGCGCCGC GGCGGCCCCG CGCTGACCGA GCTGCCCGCC GATGTGGGCA CCTACGCCGG ACAACTGCTG GGAGCCCCAC GGCATCTGGG TATCCATTCC GGGGGGATGG TGATCTGCGA CCGACCGATC ATCGACGTCG TGCCCGTCGA GCACGCCCGC ATGGACAAAC GCACCGTCCT GCAGTGGGAC AAAGACGACT GCGCCGACGC CGGCCTGGTG AAGATCGACC TCCTCGGGCT CGGGATGCTC ACCGCGCTGC GCGAGGCCCG CGACGTCGCC AATGCCCACT ACGACGTTCC CGTGGATTTG GCCGCGCTGA CTCCGGACGA CGCGGAGGTG TACGCGATGG TCCACAAAGG CGATGCGATC GGCACGTTCC AGATCGAATC CCGTGCCCAG CTACAACTCG CCCCCCGGCT GCGCCCGGCT AACCTGCATG ATCTGGCCGT CCAGATCGCG TTGGTGCGGC CGGGCCCGAT CCAAGGCGGT GCGGTGCATC CGTATCTGCG GCGCCGCGAC GGCCTCGAGC CTGTCGTCTA CCCCCACCGC CTCGCCCAAC CCGCACTGGA GAAGAGCCTG GGTGTGCCGC TGTTTCAGGA ACAAATGATG CAACTGGCCG TCGACTGTGG CGGGTTCAGC CCAGCGGATG CCGACGAGCT GCGGCAAGCC ATGGGCGCCA AACGATCGGC CGAACGCATG CACCGCCTCA AAGACCGGTT CTACGCGGGC GCGGCAGCCA ACGACATCCC ACATGCCACG ATCGACGACC TATGGTCGAG AATGGAGGCA TTCTCCGGAT ACGGGTTTCC CGAGTCACAC GCGATCAGTT TCGCCTACAT CGCCTACGCC TCTTGCTACC TGAAGAGGTA CTATCCGGCG GCGTTCCTGA CGGGGCTCAT CAGGGCCCAG CCGATGGGGT TCTACTCGAT CAACACCCTC ATCGCCGATG CCCGCCGCCA CGGCGTGAGG ATCCACCCCG TCCACATCAA CCACAGCCAC GCCACCACCA CACTCGACGG ACACGGCACA CCCGCACCCG CTGATGCACC CGCCAGGCAG TGGGGGAGCG GCGGCCCGGC CGTGCGGTTG GGCCTGAACC AAGTCCACGG CATCTCTGAC ACCGTCGCCG AGCGCATTGC CGTGGGCCAG CCCTACACGT CGATCACCGA CCTGGCCCGC CGTGCCGGGC TCACCGAAAC CCACCTGGAA AACCTCGCCA CCGCCGGCGC CCTCACCGCT CTCGGCCCTA CCCGCAGGCA AGCACTGTGG ATGGCCGCGC CCGCCGCCGC CAACACCCAC GACACGATCG ACGGCACCAT CCAGCTCACC GCGCCCATGC TGCCGGGCAT GAGCAACGCC GAACTCACCG CCGCCGACCT GACCGCGACG GGCTCCTCCG TCGACTCCCA CCCAATCGAA CACATCCGCC ACCAGCTCGA CGCCCATGAC GCCACCCCGA TCGACCAACT CGCAACCCTC CCAGACCGCA CCCGCGTAGT CGTCGGCGGC ATCGTCACCC ACCGCCAAGC CCCCGAAACC GCCGGAGGCA TCTTGTTCAT CAACCTCGAA GACGAAACCG GCCAAGCCAA CATCGTCTGC GAACCCGGCC TTCGCCTCGC CTACCCCCGC GAAGCCCACG CCACCCCCGT ACTCCTCATC CGCGGTCAAC TCCGCAACGC AGGCGGCGTC ACCTCCATCA CCGCCGACAA ACTCACCCCA CTCCACACAC CGATGCCAAC GAAACCGCGC AACTTCCGGT GA
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Protein sequence | MGKPRHLRLV TDDEPTPPAS SPPAVEAGGY AELHAHSNFS FLDGASSPED LVAEALRLGL SGLAITDHDG LYGAVRFAQA AKGTGLATVY GAELSIGLTG ERAGVPDPSG THLLVLARGA EGYAKLSAAI GNAHLAGGQK GLPDYGSLEG VAARLRGHVV VLTGCRKGPV RRALDAGGVD AARVELERLV ELFGRDGVYV ELTDHQAFTD GDRNEALADL ASELGLSVVA TNNVHYARSS RHRLSQVAAA VRANMPLDEL DGWLPAAPTA RLCSPDEMVE RFAPFGGAVA SSLRLARELA FDLDLVAPAL PPFPVPAGHD EDSWLRHLVQ AGAAERYGPL GSRSDVVRQL DHELDVIKRL GFAGYFLIVH DIVDYCRREG ILVQGRGSAA NSVVCFTLGI TAADPIAFKL LFERFLSPAR EGPPDIDLDI EARRREAVIQ YVYDTYGRTY AAQVANVITY RRRSAIRDSA AALGYSPGQV DAWIAASPRR GGPALTELPA DVGTYAGQLL GAPRHLGIHS GGMVICDRPI IDVVPVEHAR MDKRTVLQWD KDDCADAGLV KIDLLGLGML TALREARDVA NAHYDVPVDL AALTPDDAEV YAMVHKGDAI GTFQIESRAQ LQLAPRLRPA NLHDLAVQIA LVRPGPIQGG AVHPYLRRRD GLEPVVYPHR LAQPALEKSL GVPLFQEQMM QLAVDCGGFS PADADELRQA MGAKRSAERM HRLKDRFYAG AAANDIPHAT IDDLWSRMEA FSGYGFPESH AISFAYIAYA SCYLKRYYPA AFLTGLIRAQ PMGFYSINTL IADARRHGVR IHPVHINHSH ATTTLDGHGT PAPADAPARQ WGSGGPAVRL GLNQVHGISD TVAERIAVGQ PYTSITDLAR RAGLTETHLE NLATAGALTA LGPTRRQALW MAAPAAANTH DTIDGTIQLT APMLPGMSNA ELTAADLTAT GSSVDSHPIE HIRHQLDAHD ATPIDQLATL PDRTRVVVGG IVTHRQAPET AGGILFINLE DETGQANIVC EPGLRLAYPR EAHATPVLLI RGQLRNAGGV TSITADKLTP LHTPMPTKPR NFR
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