Gene Snas_3581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3581 
Symbol 
ID8884780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3795733 
End bp3796428 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content61% 
IMG OID 
ProductCas5 family CRISPR-associated protein 
Protein accessionYP_003512335 
Protein GI291301057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTC ACGGCACCGC GATCACACTT CCCACCGATC CACACGGTCA TCGACCGGTG 
GCGGTCCAAG TGTGGGGGGA CGCGGCCTTG TTCACTCGCC CCGAACTCAA AGCCGAACGA
CTGACGTATC CCGTCATGAC CCCCAGTGCC GCCAAGGGTG TTTTGGAAGC GATCTATTGG
AAGCCAGAAA TGGCTTACCA AGTCGTGGCC ATTGAGGTGC TCAAACCGAT CAAGCAGTTC
ACGGTTCGTC GCAATGAGAC TAACGACGTG GCGTCGTTGC GTGATGCAGC AAAAGGTGTG
CGCCGCATTG ATACCGCGGC GAAACGCGAC CAACGCAACG CGGTATGCCT GCGTGACGTG
GCCTACCGAA TCCACGCCCA CATTCGACTG CAACCGCACG CCAACAAACC CGTGGTGGCC
TATCGCGATC AGTTCCGGCG CCGCGTCGAC AAAGGAGCAT GCTTTGCCCA GCCGTATCTG
GGCACCCGCG AGTTCACCGC CTACTTCGGC AAACCCGACG GCACACCCGC TCGTGACGAG
CTTGATGGAG ATTTGGGCAT CATGATCCAC ACGGTGGGAT ACGACGGTGA TCACGCCATG
GAATGGTTCA CCGCCCGCCT TGATCGCGGG GTACTTCGCG TTCCCGAACG GGGCATCGTC
GCCGAGGCAT CGCACATCAG TGCGGCGGTG GGCTGA
 
Protein sequence
MTPHGTAITL PTDPHGHRPV AVQVWGDAAL FTRPELKAER LTYPVMTPSA AKGVLEAIYW 
KPEMAYQVVA IEVLKPIKQF TVRRNETNDV ASLRDAAKGV RRIDTAAKRD QRNAVCLRDV
AYRIHAHIRL QPHANKPVVA YRDQFRRRVD KGACFAQPYL GTREFTAYFG KPDGTPARDE
LDGDLGIMIH TVGYDGDHAM EWFTARLDRG VLRVPERGIV AEASHISAAV G