| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3572 |
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| Symbol | |
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| ID | 8884771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3786080 |
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| End bp | 3788824 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003512327 |
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| Protein GI | 291301049 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACAC CGGGTCTGGG GCCCATCTCG AAACGCGAGG CCGAGGTGCT CGCCGTTTTG
GGCGAGCACC TGACCAACGC CCAGATCGCC CACCGGTTGC ACATCTCGGT GCGGACCGTC
GAGAACCATG TGTCGTCGCT GCTGCGCAAA CTGGGCGCGG CGAACCGTCA GGCACTGGCC
GCGATCGCCG GGCCGCGTCC GGATGCGCCG TCGCCGGGAA CCGTGATCGG CATACCGCAC
GGACACACCA CCTTCGTGGG GCGGCGGCCG GATCACGACG CCGTGGTGAC GGCGTTGGCC
GACGCCCGGC TGGTGAGCCT GATGGGGCCC GGCGGGATGG GCAAGACCCG GCTGGCGGCC
GTGGTCGCCA CCGCCGTGGC ACCGGCGTTC CCGGCCGGGG CGGCGTTCGT GGACCTGGTC
CCTGTGCGGC CCGGACAGGT GACCGTGGCG GTGGCGCAGG TCCTGGGCGT GACCGAGCGG
CCGCCGCAGA CCCTGGACCA CACGATCGTC GGCTGGCTCA AGCAGGGCAG GTTCCTGTTG
GTCCTGGACA ACTGCGAACA CGTCGTCGAC GATGTCGCCG CCCTGGCCGC GATGGTCCAG
CAGCGGTGTC CTAACACGAC GATCCTGGCC ACCACGCGGC GGCGCCTGGC CGTACCGGGT
GAGCAGGTGG TTCGGCTGGG GCCGCTACCG ATCGAACCGG ACGCGGTGCG ACTGTTCTTC
GATCGCGCCC GCGCTGTCGA CGCCGAACTC GACATCGACC CCCAGACAGC GGCGGCCATC
TGCCGCAACC TGGACGGCAT GCCGCTGGCC GTCGAGATCG CCGCGGCCCG TGCTGCCTCG
CTGGGCGCCG AGGGGCTACG CGCGGCGGCG GGCGATCGGC TGCGGCTGGC CAGCGGTACC
AGGGGCGTCC ATCCGAGACA CTCGTCGCTG AGCGCGGTCA TGTCCTGGAG CTACGACCTG
CTCGACACCG AGGCGCAGGC GGCCTTGCGG GCGTTGTCGG TGTTCACCGG TTCCTTCGAC
CTTTCCGCGG TCGCCGCGGC GACCGCATCA ACGCACGACA GCGCCGTCGC CGACGTGATC
GGTCGGCTCG CCGATGACAG CCTGGTGGTG CGCGACGGCC GGTTCGGGCG TGGCCGTTGG
CGACTGCTCG ACACCGTGCG CGCCTTCGCC GCGCAAAGAC GCGACCCGGC CGAGCACTCG
CGAGTGCGGG AACGCTACAT CGCCTGGGCA GCCCAGACAG CCGCACGCCT GGCAGCCGAG
CTCGGTGACG ACGAGCAACT CGATTTCGCC GCGGTCGCCG CCGATCTCAG GGCGGCAGCG
GCTTCAACGG CGGCAAGCCC CGATCCCACC GCACACCGCC TGGCCGTCTC ACTGGCCACA
GTGACCTTCG CGTATGGATT CAACCGCGAA GCCCGTGAGC ACTTCACCGG CGCCGCCCAA
CGCGCCCCCG ACGCCCGCCA GGCGGGTCGA GACCTGTGCG CCGCCGCGAA TGTGGCCACC
GCCGTGTACG ACGGCCCGGC GGCTTTCGAT CTGTTTCTGG CCGCGGCCAA CCGTTCCCGT
GCGGCGGGCC TCGACAACGA CGCTGCCGCC GCCACCGCCT CGGCCCTCAT CACCGCGCTG
CGGTTTCCCG GCGAGTTCCC GCAGCGGCTG ACACCAGAAG ACGGCGCCCG CCTGTTGGCC
ACCGCGATGC GCGACGCCAC CCAGGACGAC CCCCGCACCG CGGCGCTGAT CGCGGCCGCC
CGGGCATGGA ACGACGGCAC CGGCGCCGAC GAAGCCCTGG AACTCGCGCG CGCACTCGGC
GACCCGCTGC TGTTGCTGGG CGCGTTGGAC ATCGCCATGA CGGATCCCGG GCGGCGCGCC
CAGGTCGGCG AGTTCGTGGC CGAGCGCCTG CGCCTCGTTG CCGAGCTGCC GCGTCACGAT
CCAGCAGCCG CCACCGAGAT CACCGACACT TTCCACGTCG CGACCTCCCA CGCCGTGGCG
ACCGGCGATC TGCCCGCCGC CGCATCGATT CTCGAGACCG CGGCGGCACA GGACCCGCTG
GCGGGCCACC CCTACGTCAC AGCGCCACGA CGCATCCGGG TCGCGGTACT CGCGGGCCGG
TTCGGTGAAG CCCTCGCCGC CACCGAAGCG CTGTGGGACG AGTGGCAACG CGACGGCGCC
CCCACCCGCC GCTGGATGGC CACCGCTGTG GCGATGGCAG CACTGGCCGA AGGCCTGCGC
GGCACCAGCC ACAGCCACCG GTGGCGGGAA CGGGCACTGC GGGTCGCCCA AACCGACGAC
GTGACCGGCT CGATCGAACT GGCGGCGTGC ATCGCGTTCG TCGACGCCCG CCTAGCAGTA
CACACTGGAC ACACGGTCGA CGCCGGTGCG ATGGTCAAGC GAGCGTTCGC GTCCTTCAAG
GACGAAACGG TGGTGCCGCA TCCAGCCGTG GGCGGCCACA TCTGGAAGAG TTACGCACGC
GCCGCTGCTG CCGAACTGGC CGTGTTCGCG GGCCTGCCCG ACGCCGGGGA ACTGCTTACG
GCCGCCAGCC ACCACGCCGC CGACAACCGT TGGGCGGCAG CCTGTCTGGC ACGGGCGCGA
GGGCGCCTGA CCGGGGAACC CGAGCACCTG GCCAGCGTCG CGGCGCAATG GGACCGGATA
GGTGCACGCT TTGAACGGGC CTGCACCCTC ATGTTGATAC CGGAACACCG CGACGAGGCA
CGCACCGAAC TGGAAGCTCT CGGAGCCTCC TCCCCCGCGC TGTGA
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| Protein sequence | MDTPGLGPIS KREAEVLAVL GEHLTNAQIA HRLHISVRTV ENHVSSLLRK LGAANRQALA
AIAGPRPDAP SPGTVIGIPH GHTTFVGRRP DHDAVVTALA DARLVSLMGP GGMGKTRLAA
VVATAVAPAF PAGAAFVDLV PVRPGQVTVA VAQVLGVTER PPQTLDHTIV GWLKQGRFLL
VLDNCEHVVD DVAALAAMVQ QRCPNTTILA TTRRRLAVPG EQVVRLGPLP IEPDAVRLFF
DRARAVDAEL DIDPQTAAAI CRNLDGMPLA VEIAAARAAS LGAEGLRAAA GDRLRLASGT
RGVHPRHSSL SAVMSWSYDL LDTEAQAALR ALSVFTGSFD LSAVAAATAS THDSAVADVI
GRLADDSLVV RDGRFGRGRW RLLDTVRAFA AQRRDPAEHS RVRERYIAWA AQTAARLAAE
LGDDEQLDFA AVAADLRAAA ASTAASPDPT AHRLAVSLAT VTFAYGFNRE AREHFTGAAQ
RAPDARQAGR DLCAAANVAT AVYDGPAAFD LFLAAANRSR AAGLDNDAAA ATASALITAL
RFPGEFPQRL TPEDGARLLA TAMRDATQDD PRTAALIAAA RAWNDGTGAD EALELARALG
DPLLLLGALD IAMTDPGRRA QVGEFVAERL RLVAELPRHD PAAATEITDT FHVATSHAVA
TGDLPAAASI LETAAAQDPL AGHPYVTAPR RIRVAVLAGR FGEALAATEA LWDEWQRDGA
PTRRWMATAV AMAALAEGLR GTSHSHRWRE RALRVAQTDD VTGSIELAAC IAFVDARLAV
HTGHTVDAGA MVKRAFASFK DETVVPHPAV GGHIWKSYAR AAAAELAVFA GLPDAGELLT
AASHHAADNR WAAACLARAR GRLTGEPEHL ASVAAQWDRI GARFERACTL MLIPEHRDEA
RTELEALGAS SPAL
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