Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3513 |
Symbol | |
ID | 8884712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3723932 |
End bp | 3725557 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003512269 |
Protein GI | 291300991 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.709638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.461992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGC CAGTGTTGAG TATCCGCGAC CTGTCGGTGG CCTTCCGCAC CAACGGATCC GACGTCACCG CCGTCAACGG TGTCAGCCTC GACGTACCGC AGGGCCACAC CGTCGCCGTG GTCGGCGAGT CCGGCTCCGG AAAGTCCACG ACGGCCGCCG CCGTCAACCG GCTGCTGCCC GCCAACGGGC GCATCACCTC CGGCCAGGTC CTGTTCAAGG GCGAGGACCT CGCCGACCTG AGCGAACGCC GGATGAGGGC CATCCGGGGC GCCGGGATCG GGCTCGTCCC ACAGGACCCC ATGTCCAACC TCAACCCGCT GCTGCGCGTC GGCGACCAGG TCGCCGAGGC GCTTGAGGTC CACGACCGCG CGCACGGCAG GACCGCCCAC GCCCGCGCCG TCGAACTGCT CGACAGCGTC GGCATCCCCG ATGCGGAGCG GCGCGCTCGC CAGTACCCGC ACGAGTTCTC CGGCGGTATG CGGCAGCGCG TCCTCATCGC CATGGGGCTG GCCTGCGAAC CCAGCCTGCT GATCGCCGAC GAACCGACCT CCGCCCTGGA CGTCACGCTC CAGCGCCGCA TCCTCGACCA GCTGGACACC CTCACCACGA ACCTGGGCAC CAGCGTCCTG CTCATCACCC ACGACCTGGC CCTGGCGGCC GAACGCGCCG ACACCGTCGC CGTCATGTAC CACGGCGAGA TCGTGGAATC CGGTGGCGCG CAGGACATCC TGGCCGACCC GCAACACGAG TACACCCGCA GGCTGCTGGC CGCCGCACCC AGCCTCACCT CCGCGACCAC CGTCGCCGGG CCCCTGGAAC CCGAAGCCCG TCCCGACGCC ACCGATCTCA TCACCGTGGA CAAGCTCACC AAACGGTTCC CGATCCGGGC CTCGGGCTCT AGCTCCGAGT TCACCGCCGT CGACGAGGTC GGCTTCACCA TCCCGCGCGG CCACACCGTG TCCATCGTGG GGGAATCGGG CTCCGGCAAG TCCACCACCG CCAACCTGAT TCTCGGACTG GAGAAGCCGA GCTCCGGCAG CATCGCCTTC GAAGGCGCCG ACATCACCAC GATGAACCAG AAGGAGACGT TCGCGCTGCG CCGCCGCGTC CAGCCGGTGT TCCAGAACCC TTACGCGTCA CTCGATCCCC GATACACCGT CGAACAGTCC ATCGCCGAGC CGCTGCGGGT TCACCGCGTC GGCGACAAGA AATCGCGCCA CGACACCGTT GTCAAGCTCC TCGACCAGGT GGCGTTGCCG TCCACGATGG CCGAACGGCT CCCCCACGAA CTGTCCGGCG GCCAGCGCCA GCGGGTGGCG ATCGCCCGCG CCATCGCGCT GTCGCCCGAC CTCGTCGTCC TCGACGAGGC GGTGTCGGCG CTGGACGTGC TCGTGCAGGC CCAGATCCTG GAGCTGCTGT CCGAACTGCA ACGCGAACTG GGGCTCAGTT ACCTGTTCAT CAGCCACGAC CTGGCGGTGG TGCGGCTGAT CTCCCACGCC GTGCACGTCA TGCGCGACGG CAGGATCGTC GAAAGCGGGA CACCGCAGGC GATCTTCGCC AACCCGCAGG ACGACTACAC CCGCGAACTG CTCGCCGCCA TCCCCGGAGC GGGCCTGGCC ACGTAG
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Protein sequence | MNQPVLSIRD LSVAFRTNGS DVTAVNGVSL DVPQGHTVAV VGESGSGKST TAAAVNRLLP ANGRITSGQV LFKGEDLADL SERRMRAIRG AGIGLVPQDP MSNLNPLLRV GDQVAEALEV HDRAHGRTAH ARAVELLDSV GIPDAERRAR QYPHEFSGGM RQRVLIAMGL ACEPSLLIAD EPTSALDVTL QRRILDQLDT LTTNLGTSVL LITHDLALAA ERADTVAVMY HGEIVESGGA QDILADPQHE YTRRLLAAAP SLTSATTVAG PLEPEARPDA TDLITVDKLT KRFPIRASGS SSEFTAVDEV GFTIPRGHTV SIVGESGSGK STTANLILGL EKPSSGSIAF EGADITTMNQ KETFALRRRV QPVFQNPYAS LDPRYTVEQS IAEPLRVHRV GDKKSRHDTV VKLLDQVALP STMAERLPHE LSGGQRQRVA IARAIALSPD LVVLDEAVSA LDVLVQAQIL ELLSELQREL GLSYLFISHD LAVVRLISHA VHVMRDGRIV ESGTPQAIFA NPQDDYTREL LAAIPGAGLA T
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