Gene Snas_3470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3470 
Symbol 
ID8884669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3670433 
End bp3670876 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003512227 
Protein GI291300949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.753379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.434423 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATCT CACGGGGACA GGAAACCCTG ACCAGAGACG AATGTGTACA CCTCCTCAGA 
ACCGCCGTGT TCGGGCACAT CGGCATCACC GTCCGCGCGC TGCCGATGAT CGTTCCGGCA
CGGTTCGTGG TTGACGCCGG CAGGATCGTC ATACCCGTCT CCTCGTCGAG CGAGGTACTT
CACGCCTCGC AAAGCTCCAT AGTGGCCTTC GAAGCGAACG ACGTGAACAC GCACACCGGG
GAGGGATGGA GTGTCCTCGT GGTGGGACGG GCCCGGGTCG TGGAGGAGGG CCCGGAGTTC
GACAGACTCG CCAGGCTCGC CAACCTGATG TGGGTCACCG CACCCGAGAC CAGGTACATC
GTCATCGCCT TGGACATGGT CAGCGGGCGC CGCTTCGGCG AGACCGGTGA CCTCGCCGAG
ATAGCGCGGC CTTCGGCGAA CTGA
 
Protein sequence
MPISRGQETL TRDECVHLLR TAVFGHIGIT VRALPMIVPA RFVVDAGRIV IPVSSSSEVL 
HASQSSIVAF EANDVNTHTG EGWSVLVVGR ARVVEEGPEF DRLARLANLM WVTAPETRYI
VIALDMVSGR RFGETGDLAE IARPSAN