Gene Snas_3467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3467 
Symbol 
ID8884666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3667847 
End bp3668854 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content69% 
IMG OID 
ProductTransketolase central region 
Protein accessionYP_003512224 
Protein GI291300946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.538791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0707668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGAA CCGAACCCGC CACCACCGAA GCGCGGACCG TCACCCTCAC CTATCGCGAA 
GCCATGCGCG ACGCGCTGCG CCGGGCACTG GCCGACGAAC CGGTCTTCCT GATAGGTGAG
GACGTCGGCC AGTACGGCGG CGCCTTCGGC GTCACCCTGG GACTCCTGGA GGAATTCGGC
CCCGAGCGCG TCATCGACAC CCCGCTGTCC GAATCCGGCT TCGTCGGGGC CGGCATCGGT
GCCGCACTGG GCGGAACACT GCCGATCGTC GAGGTCATGA CGGTCAATTT CAGCCTGCTG
GCTTTGGACC AGATCCTCAA CAACGCCGCA ACACTGTCGC ATATGTCCGG TGGTCGACTC
CATGTGCCGC TGGTGATCCG CATGACCACC GGCGCCGGAC GACAGCTGGC GGCCCAACAC
TCGCACAGCC TGGAGGGCTG GTACGCCCAC ATACCGGGCC TGCGCATCCT GGCACCAGCC
ACTGTGGAAG ACGCCAGGGG GATGCTCGCG CCCGCCCTGG CCGACCCCGA CCCGGTGCTG
ATCTTCGAAC ACGGCTCGCT GTACAACGAC AAGGCGACCC TGCCCGCGAC ACCGGTGCCG
GTCTCCATCG ACACCGCCGC GATCCGGCGC CCCGGGACCG ATGCCACCGT CATCGGCTAC
GGCGGAACGC TCGCGACGGC CCTGTCCGCC GCGGACCAGC TGGCGACGGA GGGCATCCAG
GCCGAGGTCA TCGACCTCCG CAGTCTGCGG CCGCTCGACG ACGCCACGAT CATGGAGTCG
GTCAGCCGTA CCCACCGCGC GGTGATCGTC GACGAGGGCT GGCGTTCGGG CAGTCTGGCC
GCCGAGATAA GCGCCCGCAT CACCGAACAG GCCTTCTACG ACCTGGACGC ACCCGTGGAA
AGGGTGTGTT CGGCCGAAGT GCCCATGCCC TACGCGCGGC ACCTGGAACA GGCCGCGCTA
CCGCGTCCGT CCGACGTGGC GGCTTCGGTG AGGCGGACGG TGAACTGA
 
Protein sequence
MTGTEPATTE ARTVTLTYRE AMRDALRRAL ADEPVFLIGE DVGQYGGAFG VTLGLLEEFG 
PERVIDTPLS ESGFVGAGIG AALGGTLPIV EVMTVNFSLL ALDQILNNAA TLSHMSGGRL
HVPLVIRMTT GAGRQLAAQH SHSLEGWYAH IPGLRILAPA TVEDARGMLA PALADPDPVL
IFEHGSLYND KATLPATPVP VSIDTAAIRR PGTDATVIGY GGTLATALSA ADQLATEGIQ
AEVIDLRSLR PLDDATIMES VSRTHRAVIV DEGWRSGSLA AEISARITEQ AFYDLDAPVE
RVCSAEVPMP YARHLEQAAL PRPSDVAASV RRTVN