Gene Snas_3424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3424 
Symbol 
ID8884623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3627291 
End bp3628379 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID 
ProductFAD-dependent pyridine nucleotide-disulfide oxidoreductase 
Protein accessionYP_003512181 
Protein GI291300903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.319709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.250706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCTC GGGTGAACAC TGATACCCCT CCCGTTGTCA TCGTCGGAGC CGGACAGTCC 
GGTCTGGCCG CCGCCCGCGC CGTTCGTGAC GCCGGGCTAC GCCCGCTCAT CCTCGAAGCC
GGTGACCGAG CCGCGGGCTC ATGGCCGCAC TACTACGACA GTCTCAAGGC TTTTTCGCCC
AACCGGTTCA ACAACCTCGC CGACATCGAC TTCGGCGGTG AACCCGACGA CTACCCCACT
CGCGACGACG TCGCCTCCTA CCTGGAGCGG TTCGCCGCCG GTCTCGATGT GGAGATCCGC
ACCCGGACCC GGGTCACCGA CGTGTCCGTC GCATCCGGAC GCTACCTGGT CACCACGGCC
GACGGCGGCA CCGTGGAAGC CTCCGGTCTG GTGGCGGCCA CCGGCTCGTT CGCCAACCCG
CACATCCCCG AACTCCATGG GACCGAACGC TTCGCAGGAA GGCTGCTGCA CGTCGCCGAC
TACCGTGAAC CCAGCCCCTA CAAGGGACAG CGCGTTGTCG TGGTCGGCGC GGGCGACTCC
GCCGTCCAAG TCGCCGTCGA ACTGGCTCAC GTCGCGACGG TGACCCTGGC CAGCCACCAC
ATGCCGCAGC TCGTCCCGCA ACTGGTGAAC GGCCGCGACG TCCACTACCT GCTCACCGAC
CGTTTCGACG ACCTGCCACC CGCGTGGCTG GCACGCCTGC TGACCGGCAA GCTGGTCATG
GACACCGGCG GCTACGCCGA CGCCTTCGAC TCACGACTGC TTGATCGCCG GGACATGTTC
ACCGGTCTCA CCGATCACGG GGTGGTGTGG CGCGACGGCA ATAGCGAGCC CGTCGACGCG
ATCATCCTGG CCACCGGATA CCGGCCCAGC CTGGGCTACC TGAAATCCCT GGGCGCCTTG
GACGAGAACG GTATGCCGCT GCACTCTCAA GGCGTGTCAC TGACCCATCC GGGCCTGGTC
TTTCTCGGCG TCGAATACCA GCGCAACTTC GCCTCCAACA CCCTGCGCGG GGTCGCCGCC
GACGCCGCGC ACGTCACTCC GGCCCTGGCC GCCTTCGCAT CAGGCGCTCA TCTGCCGTTC
GTGGCATAA
 
Protein sequence
MIARVNTDTP PVVIVGAGQS GLAAARAVRD AGLRPLILEA GDRAAGSWPH YYDSLKAFSP 
NRFNNLADID FGGEPDDYPT RDDVASYLER FAAGLDVEIR TRTRVTDVSV ASGRYLVTTA
DGGTVEASGL VAATGSFANP HIPELHGTER FAGRLLHVAD YREPSPYKGQ RVVVVGAGDS
AVQVAVELAH VATVTLASHH MPQLVPQLVN GRDVHYLLTD RFDDLPPAWL ARLLTGKLVM
DTGGYADAFD SRLLDRRDMF TGLTDHGVVW RDGNSEPVDA IILATGYRPS LGYLKSLGAL
DENGMPLHSQ GVSLTHPGLV FLGVEYQRNF ASNTLRGVAA DAAHVTPALA AFASGAHLPF
VA