| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3349 |
|---|
| Symbol | |
|---|
| ID | 8884548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 3548291 |
|---|
| End bp | 3549970 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003512108 |
|---|
| Protein GI | 291300830 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA TGAACAATTG CCCATCGAGG GTTGAGGCTC TCGAAGCCCT TCGCCCCAAG
TCCAATCGTT CCCGAAGCTC CTTTGTACTG CGCCTTGTCA GCTTGATCAT CAGCATCGTC
GTGGTGATGA GCGGTCTGGT GGTGACGTCG GGTGCCGCCG TGGCCGTCGA GCCGTCGGCG
GAGCCGAGAG TGTCCGATGA TCCGCCTGCT GTGGCTCCGG CGCCGGTGTG CGGGAACGCT
GACATCTTGG ACGGTCCGGC CGAGCCGCCG ACCAATGCGA CCGTGGTTCC CGCCGGGAAC
AACAACGACA TGTTCTACGA CTTCCGGCAG GCCGATCGGA CGTTTTGGTT CGCGCCTGGG
GTTCACATGA TGGACGCTGA CCCGTATGGG CAGATCGAGC CGGGTAGCGG GACGACTTTT
GTCGGAGCAC CGGGTGCGAT CTTTGACGGT CAGGGGATCA ATCGGGCCGC GTTCACGCAG
GGCGCCACGA ATGTGACCAT CGAGCACTTG ACGATCCGGG GGTTTGTCGC GCCGCAGGAT
CAAGGTGTGG TGAACAAGGA CGCCGCGCGC GGGTGGAAGG TTCGCAACAA CACGATCACC
GAGAACAAGG GCGCCGGGCT GATGGCTGGG CGCGACAACG TGTACAGCGA CAACTGCATT
AAGGACAATG GTCAGTACGG CATCAACGCT TGTTGCGGGG GTCATTCGGA GACCACCGAT
ATCGCCAACT TCGTGCTCGA CGGCAACGAG ATCGTCGGTA ACAACACCGA CGACTGGGAG
ACCCAGGTTC CCGGTTGCGG TTGCAGTGGC GGCGTTAAGT TCTGGATCAA CCGCAATGTC
ACGGTGACCG ACAACTGGGT GCACGACAAC CGTGGGGTCG GGCTTTGGTT GGACAACAAC
AACCGTGGCT TCGTGATCGA GCGCAACCTG ATCGAGGAGA ACGACGACCA GGCCCTGTTC
ATCGAGGCCG GGTATGACGC GCGGGTGCGG TTCAACACGA TGCGCCGCAA CGCCATCGTC
GCGGGCAAGA AGAAGGCCGA CAAGGGTGAC ACCTTCCCTG TGGGAGCGGT GTACGTGTCC
GAGAGCGGTA GCCCGGAAGG GTACGGTCTC GCCTCGCCGA TGGTGATCAG CGACAACGAT
TTCATCGACA ACTGGGGTGG CGTGATTCTG TGGGAGAACC CGGACCGCTA CTGCTCTTCC
GAGGCGCATA CGCATCCACC GTTCTGCACG ATCAAGACCG ACCTGTATGA CGACGCGCAG
TGCGAAACCG CTGTGGAGAA CGACATCCCG GACGGAATCG ACAAGTACCG CTGTCGCTGG
TCCACTGAGA ACATTGTGGT GGAGAACAAT GACTTCAGTA TTGACAAGGC AGCTGTGGGG
GCCAGTTGTG TTGGAGCGCA GTACTGCGGC CTCAACGGAG TGTTCTCGAA CTGGGGGTCG
TTCGATGAGT TCCCCGGGTA CACGATTCCG TGGCGGCTCA CGTTCCAGCA GGGGATCGTG
TTCCGGACGA ACCACTACGT GGGGGATTGG TGGTTCGCGG GTTTCCAGCA GGTGCGTCCG
GACGGGAAGC GGGTGAGCTG GGCCGACTGG ACCGCTCCCG CTCCGCCGGT GCCGCCGGTG
TTCACCCATG ACAACCGGCC GACGACGTTC GGCCAGGACC AGGGGAGTAC CTACAACTGA
|
|---|
| Protein sequence | MSIMNNCPSR VEALEALRPK SNRSRSSFVL RLVSLIISIV VVMSGLVVTS GAAVAVEPSA
EPRVSDDPPA VAPAPVCGNA DILDGPAEPP TNATVVPAGN NNDMFYDFRQ ADRTFWFAPG
VHMMDADPYG QIEPGSGTTF VGAPGAIFDG QGINRAAFTQ GATNVTIEHL TIRGFVAPQD
QGVVNKDAAR GWKVRNNTIT ENKGAGLMAG RDNVYSDNCI KDNGQYGINA CCGGHSETTD
IANFVLDGNE IVGNNTDDWE TQVPGCGCSG GVKFWINRNV TVTDNWVHDN RGVGLWLDNN
NRGFVIERNL IEENDDQALF IEAGYDARVR FNTMRRNAIV AGKKKADKGD TFPVGAVYVS
ESGSPEGYGL ASPMVISDND FIDNWGGVIL WENPDRYCSS EAHTHPPFCT IKTDLYDDAQ
CETAVENDIP DGIDKYRCRW STENIVVENN DFSIDKAAVG ASCVGAQYCG LNGVFSNWGS
FDEFPGYTIP WRLTFQQGIV FRTNHYVGDW WFAGFQQVRP DGKRVSWADW TAPAPPVPPV
FTHDNRPTTF GQDQGSTYN
|
|---|
| |