Gene Snas_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3339 
Symbol 
ID8884538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3539213 
End bp3540559 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content71% 
IMG OID 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_003512098 
Protein GI291300820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.235624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA GCACGCGAAC CGAGCTTTCG GACGGCGACC TGATCAAGCC GGGCGACGCC 
GCCTACGACG AAGCCCGCAC GGTCTGGAAC GCGATGGTCG ACCGGCGGCC CCGGGCGATA
GTGCGCTGCC GCGACGCCGC CGAGGTGGCC GCCGCCGTGC GCTACGCCCG CGAACACGAC
CTGGAGATCG GCGTCCGCTG CGGCGGGCAC AGTATCGTCG GCCACGCGGT TCCCGACGGC
GGCCTCATGA TCGACCTGCG GTCGATGTCG GCGGTGAGCG TCGACCCGTC GCGCCGGATC
GCCCACGTCC AAGGCGGAGC CATGCTCGGC GCCCTCGACG CGGCGGCCCA GCGGCACGGG
CTGGCCACCA CCGCCGGAAA CGTGTCGCAC ACCGGCGTCG GCGGCCTGAC GCTCGGCGGC
GGTATGGGCT GGCTGGCCCG CAAGTACGGC CTCACCTGCG ACAACGTCGA GTCCTACGAA
CTGGTCACCG CGACCGGCGC CCTGATCCGC GCCAGCCGGG ACGAGAACCC GGAACTGTTC
TGGGGTCTGC GCGGCGGTGG CGGGAACTTC GGCATCGTCA CGCGGTTCGA GTTCCGGCTG
CACCCGGTCG GTACCCGGGC GCTGTTGGCC GACTTCACCT TCCCGCTGTC GAGTGCCGGT
CGGGTCTTGC GGGCATGGCG GGACCTGAGC CTGGACGCGC CCCGCGAGGC GACCTTCACC
GCGGCCGTCG CCGACAGCGC CGATGGGCCG AGGGTGACCG CCGGGCTGGT GTGGGTCGGC
GACCCCGACC GGGCCCGAGG GTTCCTGCCG ACGATGCGCG CCCTGGGCAA ACCGTCCTCG
CACCGCGTCG AGGAGCTGTC GTACCTGCGG TTGCAGTCCA TGGACGACAG CGTCGAGGGC
CACGCCGTCC GTCGATACTG GAAGGGTCAC TATTTCGCGG ACTTCACCGA CGCGGCGGTG
GAGGCGTTGT GGCGACGCGG TACTCAGGAC GGTCACGGTC AGCACCTGCC CTCGGTCAGT
CTGCAGTCCT ACGGGGGCGC GATCGCCGAC GTCGCCGACG CCGATTCGGC GTTCAGTCAC
CGCGATGCCC GGTTCGAGTT CGTCGGCGCG TCGCGCTGGC TCGACCCGTC CGAGGACACC
TCCCGGATCG CGGCCGCCCG GCGCTGCGGA GCCGCGCTCG ACCAGTTCGC CAGTGGCGCC
TACGTCAATA CACTCGGCGA CGACGGAGCC GCCGGAGTGC GCCGCGCCTT CCCGGCGGAC
AAGCTCGCCC GGCTCACCGC GTTGAAGGAC ACCTACGACC CCGACAACGT GTTCCATCTC
AACCAGAACA TCCGACCCAG CAACTGA
 
Protein sequence
MTNSTRTELS DGDLIKPGDA AYDEARTVWN AMVDRRPRAI VRCRDAAEVA AAVRYAREHD 
LEIGVRCGGH SIVGHAVPDG GLMIDLRSMS AVSVDPSRRI AHVQGGAMLG ALDAAAQRHG
LATTAGNVSH TGVGGLTLGG GMGWLARKYG LTCDNVESYE LVTATGALIR ASRDENPELF
WGLRGGGGNF GIVTRFEFRL HPVGTRALLA DFTFPLSSAG RVLRAWRDLS LDAPREATFT
AAVADSADGP RVTAGLVWVG DPDRARGFLP TMRALGKPSS HRVEELSYLR LQSMDDSVEG
HAVRRYWKGH YFADFTDAAV EALWRRGTQD GHGQHLPSVS LQSYGGAIAD VADADSAFSH
RDARFEFVGA SRWLDPSEDT SRIAAARRCG AALDQFASGA YVNTLGDDGA AGVRRAFPAD
KLARLTALKD TYDPDNVFHL NQNIRPSN