Gene Snas_3265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3265 
Symbol 
ID8884464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3450561 
End bp3451394 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, DeoR family 
Protein accessionYP_003512028 
Protein GI291300750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.213162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0248717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGCC GCTCGGTAAG ACGTGGCACC CGGCGACGCC ATGACCTGCT GCTGTCACTG 
CTGCGCCAGG GCACCACGCG GGTCGAGGAC CTGGCCGAGG CCCTGTCGGT GTCGGCCTCG
ACCGTCCGCC GCGACCTCAG CCGCCTGGGC GCCGAACACC TCGTGGCCCG CACCTACGGC
GGCGCAGTGG TGCCGGAGTC GTTCCACGAA CGCCCCATCA CCGACTCCGC CCGGGTCCAG
ACCGTCGCCA AGGCCGCGAT CGCCGCCGCC GCAAGGGAAC TCGTCCCGCC GGACGGCACG
ATCTTTCTCG ACGCGGGCAC CACCTGCGCG GCCCTGGCCC GGATCCTCGT CGAGAGCCCC
GACTTCGGTC ACCTCACCGT GGTCACCCGG GGACTGGAGA CCGCCATGAT CCTCACCGAG
GCGTCCTTCG TGGACACGAT CATCCTCGGC GGCCGCGTCC GTCCACTCAG TCACGGCCTC
GTCGGACCGC TCACCGAACT CGGCCTCGAC CGGCTCACCT TCGACGTCGC CTTCATGGGC
GCCGACGCCA TCGACGTCCA CCGGGGCATC GGCGAACCGA CGCTGGAGGA GACCGCGGTA
AAGGAACGCA TCGCGGCCGC CGCCCGCCAG ACGACGGTCC TGGCCGACGC CACCAAACTG
CGCGAACCCG CGGCCCCGGC CTGGACCCGA TTCGATCCCG GCTGGCTGCT CATCACCGAC
ACCGAAGCCC CCGACGACCT CGAAGACCGG GCCGCGGCGG CGGGAGTCGC CGTCATCCGC
GCCGAACCGG CCCGCCCCAC CGACGAGAAC CGGACCTCAA CCCCGGTCTC GTAG
 
Protein sequence
MERRSVRRGT RRRHDLLLSL LRQGTTRVED LAEALSVSAS TVRRDLSRLG AEHLVARTYG 
GAVVPESFHE RPITDSARVQ TVAKAAIAAA ARELVPPDGT IFLDAGTTCA ALARILVESP
DFGHLTVVTR GLETAMILTE ASFVDTIILG GRVRPLSHGL VGPLTELGLD RLTFDVAFMG
ADAIDVHRGI GEPTLEETAV KERIAAAARQ TTVLADATKL REPAAPAWTR FDPGWLLITD
TEAPDDLEDR AAAAGVAVIR AEPARPTDEN RTSTPVS