| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3252 |
|---|
| Symbol | |
|---|
| ID | 8884451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3431899 |
|---|
| End bp | 3432954 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003512015 |
|---|
| Protein GI | 291300737 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0513601 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCC CCGCCCTGCC CCGCGCGACC CTGGCCGAGG TCGCCGCGCG CGCGGGCGTC
TCCAAGGCCA CCGCCTCCAA GGTGCTCAAT GGACGCCCCG GAGTGTCGGA GGAGACCCGG
CGGCAGGTGC ACCAGGTGAT CCGGGAACTC AACTACACCC CCAGCACCGG CCCCCGGGAG
GCCACCGACC ACGGCACCGT CCACGTCGTG TTCGACACGA TCGTCAACAT GTACTCGCCG
CATGTCCTCG ACGGCGTGAT CAACGCGGGC CGTGAACTCG GCGTCGACGT GGTGACCAGC
GTCCTGGCCC CCGACGGCGT GATCCCGGAC CGGTCACTGG GCGTCGACCG GATCAAGGAG
ATCGCGGTGC GCGGCCACAC CGGACTCATC GTGGTGACCA CCCAGCTCAC CGGCGAGGAG
ATCGCCACCT GCGAGAACCT GGGCCTGCCG CTGGTGGTCA TCGACCCGGT CAACCCGCTG
GACGAACGCG TCATCAGCAT CGGCGCCACC AACTGGGCCG GGGGCGTGCA GGCCACCCGG
CACCTGCTGG GTCTCGGACA CACCCGCATC GCCTTCGCCG GGGGCGCGGA GCACTCGGTG
CCCGGCCGCG AACGCCTGCA CGGCTACCGC GAAGCCCTGG AGACGGCCGG GATCGTGCCC
GACCCGACGC TGATCCGCCG GGGACCGTTC ACCTCCGAGA CCGGCGCCGA GATCGGCGGG
TACCTGTTGG GCCTCGACGA GGTGCCCACG GCCATCTTCG CCGCCAGCGA CGCGATCGCC
GTGGGCGTCA TCCAGGTCGC CCGCTCCCGG GGCCTTCGCA TCCCCGAAGA CCTCAGCGTC
GTCGGCTTCG ACGACACCTA CGGTGCGATG TGGACCGACC CGCCGCTGAC CACCGTGCGA
CAACCGCTGC GCCAGATGGG CCGGGTCGCG GCCCGCACGC TGCTCGACAT CGCCGACGAC
AAGGTCCCCG ACTCCCACCA CGTCCAACTG GCCACCACAC TGGTGGTCCG CGATTCCACC
GCCACCCCCT CCGCCTCATC AAGGAGGTCA CCATGA
|
|---|
| Protein sequence | MTGPALPRAT LAEVAARAGV SKATASKVLN GRPGVSEETR RQVHQVIREL NYTPSTGPRE
ATDHGTVHVV FDTIVNMYSP HVLDGVINAG RELGVDVVTS VLAPDGVIPD RSLGVDRIKE
IAVRGHTGLI VVTTQLTGEE IATCENLGLP LVVIDPVNPL DERVISIGAT NWAGGVQATR
HLLGLGHTRI AFAGGAEHSV PGRERLHGYR EALETAGIVP DPTLIRRGPF TSETGAEIGG
YLLGLDEVPT AIFAASDAIA VGVIQVARSR GLRIPEDLSV VGFDDTYGAM WTDPPLTTVR
QPLRQMGRVA ARTLLDIADD KVPDSHHVQL ATTLVVRDST ATPSASSRRS P
|
|---|
| |