Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3223 |
Symbol | |
ID | 8884422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3402911 |
End bp | 3403807 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003511986 |
Protein GI | 291300708 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.928112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000218148 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAACAT TCAATGCGTC CAGCATCGGC TCCCAGGCGG GCCGCACCTT CGTCGTCACC GGCGCCAACA GCGGCATCGG CCGCATCGCC GCCAAAGTCC TGGCCGAACG CGACGCCCGC GTCGTGCTGG CCGTGCGCGA CGAGGCCAAA GGCCGCGCCG CCGCAGCGAC CATGACCGGC CAGGTCGAGG TGAAGCGCCT CGATCTGGCC GACCTGGCGT CGGTGCGGGC CTTCGCCGAG GACTTCACCG ACCCCATCGA CGTGCTCGTC AACAACGCCG GGGTCATGAT CCCGCCGCTG ACGCGCACCG CCGACGGTTT CGAGCTGCAG TTCGGGACCA ACCACCTGGG GCACTTCGCG TTGACGAACC TGCTGCTGCC CCAGGTGCGC GACCGGGTCG TGACCGTGGC GTCGATGGCT CACCACGGCG GCGCCATCGA CTTCGACGAC CTCAACTGGC AACGCAAGCC CTACCGGGCG ATGCGGGCCT ACGGGCAGTC CAAACTGGCC AACCTGCTGT TCACCACCGA GTTGCAGCGG CGCCTGAGCC AGGCCGGTTC GTCGGTGATC GCCACCGCCG CGCACCCGGG TTTCGCGGCC ACGAACCTGC TGCGGCCGGG ACGCAGCCGC CTGCTGCACA CCGTCTCAAA GGCGGTGACC AGGGTTGTCG CGCAAAGCGA GGCTGCCGGT GCGCTGCCGA CGCTGTACGC GGCCGTGACC GACGTACCCG GCGACAGCTA CGCCGGACCT AAGGGGCTGT TCGAAACCCG TGGCGCCCCG AAGCTGGTGG GCCGGTCGGC GGCCGCCAAG GACGCCGAGG TGGCCAAGCG GTTGTGGGAG GTGTCGCAGG AGCTGACGGC CGTGGTGTTC CCGCGCCAGT CGCTGCCCCG GGCCTGA
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Protein sequence | MTTFNASSIG SQAGRTFVVT GANSGIGRIA AKVLAERDAR VVLAVRDEAK GRAAAATMTG QVEVKRLDLA DLASVRAFAE DFTDPIDVLV NNAGVMIPPL TRTADGFELQ FGTNHLGHFA LTNLLLPQVR DRVVTVASMA HHGGAIDFDD LNWQRKPYRA MRAYGQSKLA NLLFTTELQR RLSQAGSSVI ATAAHPGFAA TNLLRPGRSR LLHTVSKAVT RVVAQSEAAG ALPTLYAAVT DVPGDSYAGP KGLFETRGAP KLVGRSAAAK DAEVAKRLWE VSQELTAVVF PRQSLPRA
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