| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3216 |
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| Symbol | |
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| ID | 8884415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3394236 |
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| End bp | 3397031 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003511979 |
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| Protein GI | 291300701 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0908309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000189217 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACGGTGG AGATCTCAAC CCGGGAATCC GAGGTGCTGG CGCTGGTGGG TGACCACCTG
TCCAACGCCG AGATCGCCGC GCGCCTGTTC ATCTCGGTGC GCACCGTCGA AAGCCACGTC
TCGGCGCTTT TGCGCAAACT CGCCGTCCCC GACCGTCGGG CACTGGCGCG ACACGCACCC
GACCACACCC ACAAGTCGAC CGCGGTACCG GTGTTGCCGC GGCCGTTGAC GTCGTTCATC
GGCCGCGAGG CCGAACGCGC CGCGTTGGCC GACCTGGTCA CCACGCACCG CCAGGTCACC
GCCCTGGGGC CCGGCGGCGT CGGTAAGACC CGGCTGGCGT TGCGGGTCGC CGCCGCCGTG
ACCGCGCACT TCGACGACGG CGTGTGGTTC GTCGACCTGG TGTCCACCAC CGACCCCGAC
CTGGTCGCCG CCGCCGTGGC CGCCGCGTTG GGGCTGGGGG AACAACCCGA CCGCGGCATG
CACGAATCCG TCATCTCCGC ACTGTCGTCG CAGCACGCGC TGGTGGTGTT GGACAACTGC
GAACAGGTCG TCGACGCGGT CGCGGCGTTT TTGGAGCGGC TGCTGTCGGC GTGTCCACGG
TTGAGCGTCC TGGCGACCAG CCGGGCCCGG TTGATGGTGC CGTTCGAACA CGTCTACCCG
GTGCCGCCGT TGTCGCTGTC GGGCGACGGC GACAGTGACG CGGTCGAGTT GTTCACGCAG
CGAGCCGCCG CCGCGGGCCA AGCCCCCGAC GCATCGACGC GGGAGGCGAT CGCGCACCTG
TGTCAACGCC TGGACGGGAT GGCCCTGGCC ATCGAACTGG CCGCTGCCCG CTGGCCCACG
CTCGGCCTCG ACGGCCTGAC CGCCGCCTTG TCGGATCCGT TGCGGATGCT GTCGGGGGGT
TCCCGCGCCG CCGACCGGCA CCGGTCGGTC CGCGCGGCCC TGGACTGGAG CCACGCCCTG
CTGGCGCCCG ACGACCAGAA ACTGTTGCGG CGGGTCGCGG TGTTCGCCGC ACCGTTCACC
ATGGCCGCCG CCGTACACGT CACCGGTATC GACGCCGGTG TCGTCGCCGA CGGCCTGGCC
CGCCTGAGCG AACAAAGCCT CCTGACAGCG GTGTCCACCG CCAACGGCAC CCGGTACCGG
GGCCTGGAGA CCATCCGCCA GTACGGCACC GAACGTCTCG CCGACGCCGA CGAGGAGTCC
GCCACCCGCC AGCGGCACGT GGCGTGGTGC CTGGCCACCG CCACCGACCT GACGCAGGCG
CTACCCGACT GGCGGGCCCG GTTCGACACC GTCGCCGACG AACTGCGCGC GGCCCTGGCC
TGGGCGAGCC GGCAAGCCGA GCATCGCGCC GACGCGCACG ACCTGGCCGC GCGACTGGCC
GCGTTGACGT TCACCCGCGG CCTGATCGGC GAATCGCAGC AACGACACGA ACAAGCCGCC
GCCCTCGCCA CGGACCCGCG CGACGCCGCG GTGATGTTGC GCGGGGCCGC GGCCGTGGCC
GCGTGCCGGA TGCGCGGCGA CGACATGTAC CGCCTCCACC TGGCCGCCGC CGACGCCGCC
CGCGACGCGC GCGACACCCC GGCCGCCGCC CGTGACCTGG CCACCGCCGC CACCCACGCC
TACCGGTTCT CCGGAAAGTT CACGCACCTG CCGTCCCACG ACGAAGTGGT CGCGCTCATC
GACCAGGCCC GCGACCTCGC CGGCGACGAC CCGGACGCGG TCGCGGCGGT GGCGCTGGCC
GAAGCCGGGG TCCTGTACGA CGCGTTCGGT GCCGCCCAGG GCCCAGCCGA CAACAACGTG
CCCGACACCC TCGCGCACGC GCGACGCGCC GTCGCGCTGG CCCGCGACAC CGGCGACGCA
ATCGCCCAAT CCGCGGCACT GGACACCCTG ACCGGCGCGC AAAGCTGGGG CGGCGATGCC
TTCGGGGTGG CCGCCACGAT CAACAACCGC ATCACCCTGG TGACGCCGCT GTCGGAAAGC
CCGCAACGGA CACTGGAGTT GACCGACGCG CTCAGCCAGG CCATCGAAGC CGCCCTGGGC
GTGGGCGACC TGCCCGGCGC CCGCGAATGG GTGCGCCGCC TGGCCGAGCA TCCACTGTTG
ACCGAGGTGT CGTTTCGCGC CACGAGCTGG CTGCTGGTGA TCGACGCACT GGCAGGCGAC
GTCGCCGACA TCCCCGACGT CGGCGAACGG TTCGCCGAGG CGTGGCGCAG GGCCGGTAGC
CCGCGCTCCA CCCACCTGGC TCCGGCCGCG GCCGCCGCCG TCATGGCCCA CGACCTGGGC
GGCGACGAGA CCGCCCGCCG CGAATGGGAA CAGGCCCTAG ATCACCTGGG GACCTTGCCG
GGGCACGCGT TCAGTTACCT GGCGATCTTC GACAGCATTC GCTTCCTGCA CGACGGTGAC
GTCGAGCGGG CGTGGGAACG CACCGCGCCC GAACCCGACG ACGTGTGGAA ATGGGTCACC
TGGTTGTGGC TGCACTGGTA CGTCGCGGTG CGCTGCGAGG CCGCCGTGTT GGCGGGCAGA
CCCGACGCCG CGCAACACGT CGCCAAGGCG CGCACGGTCG TGGCCGCAAA CCCGGTCGCA
GGCGCCATGG TGGAACGCGC CGACGCCCTC CTCAAGGGCG ATCGTGACCG GGTCGCGGCC
ACCGCGCGGG CGTTGACCGA CGCCGGTTGC GGCTACCAGG CGGCGCGCAG TCTGGTGCTG
GCCGGTGGCG ACCACGCCGC GCGGGGTCAG GCCGCGTTGG CGAAGCTCGG GCTGCGCCCG
ATGGCCCCGG GGCCGGAAAT CGATTGGACG CGGTGA
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| Protein sequence | MTVEISTRES EVLALVGDHL SNAEIAARLF ISVRTVESHV SALLRKLAVP DRRALARHAP
DHTHKSTAVP VLPRPLTSFI GREAERAALA DLVTTHRQVT ALGPGGVGKT RLALRVAAAV
TAHFDDGVWF VDLVSTTDPD LVAAAVAAAL GLGEQPDRGM HESVISALSS QHALVVLDNC
EQVVDAVAAF LERLLSACPR LSVLATSRAR LMVPFEHVYP VPPLSLSGDG DSDAVELFTQ
RAAAAGQAPD ASTREAIAHL CQRLDGMALA IELAAARWPT LGLDGLTAAL SDPLRMLSGG
SRAADRHRSV RAALDWSHAL LAPDDQKLLR RVAVFAAPFT MAAAVHVTGI DAGVVADGLA
RLSEQSLLTA VSTANGTRYR GLETIRQYGT ERLADADEES ATRQRHVAWC LATATDLTQA
LPDWRARFDT VADELRAALA WASRQAEHRA DAHDLAARLA ALTFTRGLIG ESQQRHEQAA
ALATDPRDAA VMLRGAAAVA ACRMRGDDMY RLHLAAADAA RDARDTPAAA RDLATAATHA
YRFSGKFTHL PSHDEVVALI DQARDLAGDD PDAVAAVALA EAGVLYDAFG AAQGPADNNV
PDTLAHARRA VALARDTGDA IAQSAALDTL TGAQSWGGDA FGVAATINNR ITLVTPLSES
PQRTLELTDA LSQAIEAALG VGDLPGAREW VRRLAEHPLL TEVSFRATSW LLVIDALAGD
VADIPDVGER FAEAWRRAGS PRSTHLAPAA AAAVMAHDLG GDETARREWE QALDHLGTLP
GHAFSYLAIF DSIRFLHDGD VERAWERTAP EPDDVWKWVT WLWLHWYVAV RCEAAVLAGR
PDAAQHVAKA RTVVAANPVA GAMVERADAL LKGDRDRVAA TARALTDAGC GYQAARSLVL
AGGDHAARGQ AALAKLGLRP MAPGPEIDWT R
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