Gene Snas_3151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3151 
Symbol 
ID8884350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3327090 
End bp3328388 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content72% 
IMG OID 
Productdihydroorotase multifunctional complex type 
Protein accessionYP_003511915 
Protein GI291300637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00059422 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCGGT GGCTGATCAC GGGAGCGACG CTGCCGGACG GCACTCGCGC GGACATACTC 
ATCGACGACG GGCGCGTCAG CCAGGTCGGG GCCGTCGGCT CCGCGACTGA GGCGACCATC
GTGGACGCCG ACGGGCTGGT GGCGCTGCCG GGCCTGGTCG ACCTGCACAC CCACCTGCGC
GAACCCGGCC GCGAGGACGC CGAGACCGTC GCCTCCGGTT CCCGGGCCGC CGCCCGCGGC
GGCTACACCG CGGTGTGCGC GATGGCCAAC ACCGACCCGG TGGCCGACAC CGCCGGAGTC
GTCGAACAGG TCCACAGCCT CGGCCGCACC GCCGGTTACG TCGAGGTGCA GCCCATCGGC
GCCGTCACCG TCGGCCTTGC CGGACAGCGG CTGGCCGAAC TGGGCGCCAT GGCCACCTCG
GCGGCCAAGG TGCGCATCTT CTCCGACGAC GGCCACTGCG TGTCCGACCC CCGGCTGATG
CGCCGGGCCC TGGAATACGT CAAGGCCTTC GACGGCGTCA TCGCCCAGCA CGCCCAGGAC
CCGCAGCTGA CCATCGACGC CCAGATGCAC GAGGGCGAGG TCTCGGCGCG ACTGGGCCTG
GCCGGATGGC CCGCGGTCGC CGAGGAGGCC GTCATCGCCC GCGACGCCCT GCTGGCCGGA
CACGTCGGCT CCCGGCTGCA CGTGTGCCAC GTGTCCACGG CCGGAAGCGT GGAGATCCTG
CGCTGGGCCA AGTCCAAGGG CTGGCGGGTC ACCGCCGAGG TCTGCCCGCA CCACCTGCTG
CTCACCGACG AACTGGCCGC CACCTACGAC CCGGTGTACA AGGTCAACCC GCCGCTGCGC
ACCGAGGCCG ACGTGCTGGC GCTGCGCGCG GGCCTGGCCG ACGGGACCAT CGACGTGGTC
GCCACCGACC ACGCGCCCCA CACCGTGGAG GACAAGGAAT GCGAGTGGGC CGCGGCCAAA
CCGGGCATGC TGGGACTTGA GACCGCACTG CCCATCGTCA TCAAGACCAT GCACGAGACC
GGAAGCCTCG ACTGGAACGC CGTCGCCGAA CGGTGCAGCC GCACCCCGGC GCGCATCGCG
GGCCTGGCCG ACCACGGCAA CGACCCGGCG CCGGGCGTGC CCGCCAACCT CACCCTCGTC
GACCCGGCCG CGCGCTGGAC CGTCGAACCC GGCGAGCTGA CCGGCCCCAG CCGCAACACC
CCCTACAAGG GACTCGAACT GCCCGGCCGC GTCATCGCGA CCTTCTTCAA CGGACGGCCC
ACCGTCCTCG ACGGCAAACT CCAGGAGGCG ACACCATGA
 
Protein sequence
MNRWLITGAT LPDGTRADIL IDDGRVSQVG AVGSATEATI VDADGLVALP GLVDLHTHLR 
EPGREDAETV ASGSRAAARG GYTAVCAMAN TDPVADTAGV VEQVHSLGRT AGYVEVQPIG
AVTVGLAGQR LAELGAMATS AAKVRIFSDD GHCVSDPRLM RRALEYVKAF DGVIAQHAQD
PQLTIDAQMH EGEVSARLGL AGWPAVAEEA VIARDALLAG HVGSRLHVCH VSTAGSVEIL
RWAKSKGWRV TAEVCPHHLL LTDELAATYD PVYKVNPPLR TEADVLALRA GLADGTIDVV
ATDHAPHTVE DKECEWAAAK PGMLGLETAL PIVIKTMHET GSLDWNAVAE RCSRTPARIA
GLADHGNDPA PGVPANLTLV DPAARWTVEP GELTGPSRNT PYKGLELPGR VIATFFNGRP
TVLDGKLQEA TP