| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3130 |
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| Symbol | |
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| ID | 8884329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3305727 |
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| End bp | 3306734 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003511894 |
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| Protein GI | 291300616 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.910041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00277477 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGAAAA CGCGTGGCTG GAGCCGCCTG ACCCGGACGA TCACCGTCCT GATCGTGATC
AGCCTCGCCG GGCTGGTCAC GAGCGGGTGC GGCTCCGGCT CCGACGACCG CATCAAGATC
GGTCTGATCA CCAAGACCGA GACCAATCCG ATCTTCATCG AAATGAAGGA CACGGCCCTG
ATCGCCGCCG AAGAAGCCGG GGCGCAGCTG CTCACCGCCA CCGGCGAATT CGACGGCGAC
AACGAGGGCC AGGTGTCCGC CATGGAGAAC ATGATCGCCG CCGGGGTGAA GGCCATACTG
ATCACCCCCA GCGACACCAA GGCGATCGTC CCGTCCGTCA AACGAGCCCA GAAGCTCGGC
ATCGCCGTCA TCTCGCTGGA CACGCCCACC GAGCCCGCCG ACGCCACCGA CGGGCTGTAC
GGCACCGACA ACTTCCGGGC CGGTGAGGTG GTCGGCGAGT ACGCCAAGGC CAAACTGGAC
GGCAAGCCCG CCAAGATCGC CACCATGGAC CTCGCGCCCG GCGTCACCGT CGGGCAGCTG
CGCCACGACG GTTTCCTGAA GGGCTTCGGC ATCAAGGAGG GCGACGAGCA GCTGGTGTGC
GAGGAGTACA CCCAGGGCGA CCAGACCAAG GCCACCACCG CGATGGAGAA CTGCCTGCAG
GCCCATCCGG ACATCAACCT CGTCTACACG ATCAACGAAC CCGCCGGGCT GGGCGCCCAC
ACCGCGCTCA AGGCCGCCGG ACGCACCGAC AAGACCACCC TGGTGGCCAT CGACGGCGGC
TGCCCAGGAG TCGAGGCCAC CGCGCAGGGC AAGTTCGACA CCACCGCCAT GCAGTTCCCC
GTGAAGATGG CCGAACTCGG CATGGACGCC GCCCTGGAAT ACGCCCGCAC CGGAGACCGC
CCCTCCGGAT ACACCGACAC CGGCGTCGAA CTCATCACCG ACGACCCCGT CGAAGGACTC
GACAGCAAGG ACACCGACTG GGGCGCCAAG CAGTGCTGGG GCGGCTGA
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| Protein sequence | MPKTRGWSRL TRTITVLIVI SLAGLVTSGC GSGSDDRIKI GLITKTETNP IFIEMKDTAL
IAAEEAGAQL LTATGEFDGD NEGQVSAMEN MIAAGVKAIL ITPSDTKAIV PSVKRAQKLG
IAVISLDTPT EPADATDGLY GTDNFRAGEV VGEYAKAKLD GKPAKIATMD LAPGVTVGQL
RHDGFLKGFG IKEGDEQLVC EEYTQGDQTK ATTAMENCLQ AHPDINLVYT INEPAGLGAH
TALKAAGRTD KTTLVAIDGG CPGVEATAQG KFDTTAMQFP VKMAELGMDA ALEYARTGDR
PSGYTDTGVE LITDDPVEGL DSKDTDWGAK QCWGG
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