Gene Snas_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3129 
Symbol 
ID8884328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3304680 
End bp3305687 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content69% 
IMG OID 
Productinner-membrane translocator 
Protein accessionYP_003511893 
Protein GI291300615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.196604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00122058 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACGA CATCGACCAC CGCCCCACCG GCGGCCCCCG TCCTCACCGA ACAGACCTGG 
ACGCGCCGGT TCCTCGGCGG CTCCACCACC GGTCCACTGT GCGCGCTGCT CATCGCCATC
GCGTTCTTCT CCACCATGGC CGACAACTTC CTCAGCCTCA ACACCGCCGC GCTGGTCCTG
CAACAGGTCA CCGTCATCGG GACGCTCGCG CTGGGACAGA CGCTGATCAT CCTGTCGGCC
GGCATCGACC TGTCGGTGGG CGCCGTGATG GCCTTCGGCA GCATCGTCAT GACCAAACTG
GCCGTCGACT CCGGGCTGCC GCCGGTCCTG GCGATCCTGG CCGGGATCGC GGTGTGCGGG
CTGTTCGGGC TGGCCAACGG CATGCTCGTC ACCAAGATCA AACTGCCGCC GTTCATCGTC
ACGCTCGGCA TGCTCAACGT CGCCTACGCG CTGACCCACA TCTACTCCAA CGAGGCCACC
ATCACCGGCG TCCCGGCCAC GCTGACCGCA CTGGGCGAGA CCTTCCCCGT CGGCGACGCC
CGGGTCAGCT ACGGCTCGCT GCTGATGCTG GTCCTGTTCG CCGCCTTCGC CGTCGTGCTC
GCCAACACCG CCTGGGGACG CCGCCTGTAC GCCACCGGCA ACAACTTCGA GGGCACCCGG
TTGACCGGCG TGCCGGTGCG CCGCCACCTG CAGTCGGTGT ACCTGGTGGC CGGGCTGGTG
TTCGGCGTGG CCGCGCTGCT GATGGTCGCC CGCACCGGCG TCGGCGACCC CAAGGTCGGC
CAGACCGAGA ACCTGGAGTC CATCACCGCG GTGGTGCTGG GCGGCACCAG CCTGTTCGGC
GGCCGCGGTG CCGTCCTGGG CACGCTGCTG GGCGTCCTGA TCGTCGGCGT GGTGCGCAGT
GGCCTGCAGA TGATGGGCGT GCTGCCGATC TACCAGATCC TCGTCACCGG CATCCTCGTG
ATCCTCGCGG TGACCTTCGA CCAGCTCTAC CGCAGGAGGA ACCGATGA
 
Protein sequence
MTTTSTTAPP AAPVLTEQTW TRRFLGGSTT GPLCALLIAI AFFSTMADNF LSLNTAALVL 
QQVTVIGTLA LGQTLIILSA GIDLSVGAVM AFGSIVMTKL AVDSGLPPVL AILAGIAVCG
LFGLANGMLV TKIKLPPFIV TLGMLNVAYA LTHIYSNEAT ITGVPATLTA LGETFPVGDA
RVSYGSLLML VLFAAFAVVL ANTAWGRRLY ATGNNFEGTR LTGVPVRRHL QSVYLVAGLV
FGVAALLMVA RTGVGDPKVG QTENLESITA VVLGGTSLFG GRGAVLGTLL GVLIVGVVRS
GLQMMGVLPI YQILVTGILV ILAVTFDQLY RRRNR