Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3129 |
Symbol | |
ID | 8884328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 3304680 |
End bp | 3305687 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | inner-membrane translocator |
Protein accession | YP_003511893 |
Protein GI | 291300615 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.196604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00122058 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCACGA CATCGACCAC CGCCCCACCG GCGGCCCCCG TCCTCACCGA ACAGACCTGG ACGCGCCGGT TCCTCGGCGG CTCCACCACC GGTCCACTGT GCGCGCTGCT CATCGCCATC GCGTTCTTCT CCACCATGGC CGACAACTTC CTCAGCCTCA ACACCGCCGC GCTGGTCCTG CAACAGGTCA CCGTCATCGG GACGCTCGCG CTGGGACAGA CGCTGATCAT CCTGTCGGCC GGCATCGACC TGTCGGTGGG CGCCGTGATG GCCTTCGGCA GCATCGTCAT GACCAAACTG GCCGTCGACT CCGGGCTGCC GCCGGTCCTG GCGATCCTGG CCGGGATCGC GGTGTGCGGG CTGTTCGGGC TGGCCAACGG CATGCTCGTC ACCAAGATCA AACTGCCGCC GTTCATCGTC ACGCTCGGCA TGCTCAACGT CGCCTACGCG CTGACCCACA TCTACTCCAA CGAGGCCACC ATCACCGGCG TCCCGGCCAC GCTGACCGCA CTGGGCGAGA CCTTCCCCGT CGGCGACGCC CGGGTCAGCT ACGGCTCGCT GCTGATGCTG GTCCTGTTCG CCGCCTTCGC CGTCGTGCTC GCCAACACCG CCTGGGGACG CCGCCTGTAC GCCACCGGCA ACAACTTCGA GGGCACCCGG TTGACCGGCG TGCCGGTGCG CCGCCACCTG CAGTCGGTGT ACCTGGTGGC CGGGCTGGTG TTCGGCGTGG CCGCGCTGCT GATGGTCGCC CGCACCGGCG TCGGCGACCC CAAGGTCGGC CAGACCGAGA ACCTGGAGTC CATCACCGCG GTGGTGCTGG GCGGCACCAG CCTGTTCGGC GGCCGCGGTG CCGTCCTGGG CACGCTGCTG GGCGTCCTGA TCGTCGGCGT GGTGCGCAGT GGCCTGCAGA TGATGGGCGT GCTGCCGATC TACCAGATCC TCGTCACCGG CATCCTCGTG ATCCTCGCGG TGACCTTCGA CCAGCTCTAC CGCAGGAGGA ACCGATGA
|
Protein sequence | MTTTSTTAPP AAPVLTEQTW TRRFLGGSTT GPLCALLIAI AFFSTMADNF LSLNTAALVL QQVTVIGTLA LGQTLIILSA GIDLSVGAVM AFGSIVMTKL AVDSGLPPVL AILAGIAVCG LFGLANGMLV TKIKLPPFIV TLGMLNVAYA LTHIYSNEAT ITGVPATLTA LGETFPVGDA RVSYGSLLML VLFAAFAVVL ANTAWGRRLY ATGNNFEGTR LTGVPVRRHL QSVYLVAGLV FGVAALLMVA RTGVGDPKVG QTENLESITA VVLGGTSLFG GRGAVLGTLL GVLIVGVVRS GLQMMGVLPI YQILVTGILV ILAVTFDQLY RRRNR
|
| |