| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3027 |
|---|
| Symbol | |
|---|
| ID | 8884226 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 3191731 |
|---|
| End bp | 3192276 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003511791 |
|---|
| Protein GI | 291300513 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.296349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAT TGGACGAACG CGAGTTCAAC GATTTCGTCG CGGCCCGGTT CGACCGGCTG
GGACGGTTCG CGTACTTGCT GTGCGGCGAC TGGCATCGTT CCGAGGACGC CGTCCAGAAG
GCGTTCACCA AGCTGTACCT GGTGTGGTCC AAACGCGACA TCAGGTCCCC GGACGCCTAC
GTGCGCCGCA TCATCGTCAA CGTCATCAAC GACGACTACC GACTGGGCTT CCTCAAGCGG
GAACGGGTCG TCGACGAGCT GCCAGACCGG CTCGGCCCGG ACGGTTCCGA GGCCAGCGAC
GACCGGCTGA TGGTGCTGGC CGCGCTGACC CAGCTGCCCA AACGGCAGCG CACCGCGGTG
GTGCTGCGGT ACTGGGAGGA CCTGCCCATC GAACAGGTCG CCGAGATCAT GAAGTGCACG
ACCGGCGCCG TGAAGAGCCA GAGCTCCCGG GGCCTGGCGG CGCTGCGCGC CATCATCGAC
GGCACCCGCT CATCCCACGA CAAGACACCC CCGGAGGGGT TGGCCCGGCT GCGCCCGGCG
ACCTGA
|
|---|
| Protein sequence | MTPLDEREFN DFVAARFDRL GRFAYLLCGD WHRSEDAVQK AFTKLYLVWS KRDIRSPDAY
VRRIIVNVIN DDYRLGFLKR ERVVDELPDR LGPDGSEASD DRLMVLAALT QLPKRQRTAV
VLRYWEDLPI EQVAEIMKCT TGAVKSQSSR GLAALRAIID GTRSSHDKTP PEGLARLRPA
T
|
|---|
| |