Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_3011 |
Symbol | |
ID | 8884210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 3176354 |
End bp | 3177556 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Aldose 1-epimerase |
Protein accession | YP_003511775 |
Protein GI | 291300497 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.415447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00870507 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCAAAT ATGCTACGCC CGACGGGATT TCGGCGAATG TGGAGCAGGG GAGCGACCTG ACTCGACGCG CGGTGGTCAT GGGCGCCGGG GTGCTCGGGC TCACCGGAGC GGTGGTCGCC ACGACCGCCA AGCCGGCGGC CGCGAAGGAC CCCGACCGGA TCCCGACGAA GTCGACTCTG GATAGTGGCC GACTGTCGGT CGACAAGGAG CCGTTCGGTG AGACCGCCGC CGGCGAAGCG GTGGACCGCT ATACGTTCGG TTCCGCCAAG GGGCTGCGGG TCCGGATGCT CACCTACGGT GCGACGATCC AGGCGATCGA GATGCCTGAC CGCCGCGGTC GGCGGGCCAG CGTCGCTCTC GGACTGCCGA CGATCGCGGA ATACGAGAGC CACGGCTCGT ACTTCGGCGC CACCATCGGC CGGTACGCCA ACCGGATCGC GAAGGGACAG TTCACCCTGG ACGGCGAAAC GCACCAGATC CCGGTCAACA ACGGCGAGAA CGCCCTGCAC GGCGGTCCCA AGGGATTCGA CAAGCGGATC TGGGCGGCGA CGCCGATCGA GGAGGACGAC CGGGTCGGCG TCAGTTTCGG TTACGTCAGC CCGGACGGCG AGATGGGTTT CCCCGGCACA TTGAACGTGA CCGTCGACTA CACGCTCGAC CGGCACCAAC GGCTGACCAT CGCCTATCGC GCTACCACCG ACCGGCCGAC GATCATCAAC CTGACCAACC ACGCCTACTT CAACCTGGGC GGTCAGAGCT CCGGCACGGT CGAAGATCAA CTGCTGTGGG TGGACGCGGA TCGCTACACG CCGGTCGACG ACAGCCTGAT CCCGCTCGGA CCGCTGGACC CGGTGGACGA CACCCGGTTC GACTTCCGCC GACCCAAGAC CATCGGCCGC GATATGGGCG GGGAAGTCTA CGACCACAAC TGGGTGCTGA ACGACTACAG CCCGGGTCAC CAACGGCTCG TGCTCGCCGC CTACGATGCG ACGTCGGGAC GCTGGCTGCG CTGCTCGACC GACCAGCCGG GAGTCCAGAT CTACACCGGG TACTCCGAGT CGGCCGACAA GAAGAGCGAC GCCTTCGCCG TGGAGACCCA GCACTATCCG GACTCGCCCA ACCAGCCGGA CTATCCGTCC ACGGTACTCA GGCCGGAGGA GACGTACGAG ACGACGACCG TCTACCGGTT CGGCGTCGCC TGA
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Protein sequence | MSKYATPDGI SANVEQGSDL TRRAVVMGAG VLGLTGAVVA TTAKPAAAKD PDRIPTKSTL DSGRLSVDKE PFGETAAGEA VDRYTFGSAK GLRVRMLTYG ATIQAIEMPD RRGRRASVAL GLPTIAEYES HGSYFGATIG RYANRIAKGQ FTLDGETHQI PVNNGENALH GGPKGFDKRI WAATPIEEDD RVGVSFGYVS PDGEMGFPGT LNVTVDYTLD RHQRLTIAYR ATTDRPTIIN LTNHAYFNLG GQSSGTVEDQ LLWVDADRYT PVDDSLIPLG PLDPVDDTRF DFRRPKTIGR DMGGEVYDHN WVLNDYSPGH QRLVLAAYDA TSGRWLRCST DQPGVQIYTG YSESADKKSD AFAVETQHYP DSPNQPDYPS TVLRPEETYE TTTVYRFGVA
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