Gene Snas_3011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3011 
Symbol 
ID8884210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3176354 
End bp3177556 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content67% 
IMG OID 
ProductAldose 1-epimerase 
Protein accessionYP_003511775 
Protein GI291300497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.415447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00870507 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAAAT ATGCTACGCC CGACGGGATT TCGGCGAATG TGGAGCAGGG GAGCGACCTG 
ACTCGACGCG CGGTGGTCAT GGGCGCCGGG GTGCTCGGGC TCACCGGAGC GGTGGTCGCC
ACGACCGCCA AGCCGGCGGC CGCGAAGGAC CCCGACCGGA TCCCGACGAA GTCGACTCTG
GATAGTGGCC GACTGTCGGT CGACAAGGAG CCGTTCGGTG AGACCGCCGC CGGCGAAGCG
GTGGACCGCT ATACGTTCGG TTCCGCCAAG GGGCTGCGGG TCCGGATGCT CACCTACGGT
GCGACGATCC AGGCGATCGA GATGCCTGAC CGCCGCGGTC GGCGGGCCAG CGTCGCTCTC
GGACTGCCGA CGATCGCGGA ATACGAGAGC CACGGCTCGT ACTTCGGCGC CACCATCGGC
CGGTACGCCA ACCGGATCGC GAAGGGACAG TTCACCCTGG ACGGCGAAAC GCACCAGATC
CCGGTCAACA ACGGCGAGAA CGCCCTGCAC GGCGGTCCCA AGGGATTCGA CAAGCGGATC
TGGGCGGCGA CGCCGATCGA GGAGGACGAC CGGGTCGGCG TCAGTTTCGG TTACGTCAGC
CCGGACGGCG AGATGGGTTT CCCCGGCACA TTGAACGTGA CCGTCGACTA CACGCTCGAC
CGGCACCAAC GGCTGACCAT CGCCTATCGC GCTACCACCG ACCGGCCGAC GATCATCAAC
CTGACCAACC ACGCCTACTT CAACCTGGGC GGTCAGAGCT CCGGCACGGT CGAAGATCAA
CTGCTGTGGG TGGACGCGGA TCGCTACACG CCGGTCGACG ACAGCCTGAT CCCGCTCGGA
CCGCTGGACC CGGTGGACGA CACCCGGTTC GACTTCCGCC GACCCAAGAC CATCGGCCGC
GATATGGGCG GGGAAGTCTA CGACCACAAC TGGGTGCTGA ACGACTACAG CCCGGGTCAC
CAACGGCTCG TGCTCGCCGC CTACGATGCG ACGTCGGGAC GCTGGCTGCG CTGCTCGACC
GACCAGCCGG GAGTCCAGAT CTACACCGGG TACTCCGAGT CGGCCGACAA GAAGAGCGAC
GCCTTCGCCG TGGAGACCCA GCACTATCCG GACTCGCCCA ACCAGCCGGA CTATCCGTCC
ACGGTACTCA GGCCGGAGGA GACGTACGAG ACGACGACCG TCTACCGGTT CGGCGTCGCC
TGA
 
Protein sequence
MSKYATPDGI SANVEQGSDL TRRAVVMGAG VLGLTGAVVA TTAKPAAAKD PDRIPTKSTL 
DSGRLSVDKE PFGETAAGEA VDRYTFGSAK GLRVRMLTYG ATIQAIEMPD RRGRRASVAL
GLPTIAEYES HGSYFGATIG RYANRIAKGQ FTLDGETHQI PVNNGENALH GGPKGFDKRI
WAATPIEEDD RVGVSFGYVS PDGEMGFPGT LNVTVDYTLD RHQRLTIAYR ATTDRPTIIN
LTNHAYFNLG GQSSGTVEDQ LLWVDADRYT PVDDSLIPLG PLDPVDDTRF DFRRPKTIGR
DMGGEVYDHN WVLNDYSPGH QRLVLAAYDA TSGRWLRCST DQPGVQIYTG YSESADKKSD
AFAVETQHYP DSPNQPDYPS TVLRPEETYE TTTVYRFGVA