| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3007 |
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| Symbol | |
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| ID | 8884206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3173558 |
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| End bp | 3174277 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003511771 |
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| Protein GI | 291300493 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0040024 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGACA ACGCCGCATC AGCGGTACCG AACAGCCTCC AAGCGGCCTG GGGCGTCCGG
GAACGACCGG GCTTCGGACC CCGTCCCGGC CTCAGCCTCG ACCGGATCGT GGCCGCGGCG
CTCGAACTGG CGGAGTCGGA CGGGCTCGCC GCGGTGTCGA TGGTCAAGGT GGCCAAAGCC
CTCGACGTGT CCACCATGGC CTTGTACCGC TACGTCGCGG CCAAGGACGA ACTGCTGGAA
CTGATGGTCG ACGCGGGTTT CGGCGAACCA CCACCCGGAC CCGAGGGCGC CGATTGGCGC
GAGGGCCTGG CGGCGTGGGT CTGGGACTGC CTGACGGCCT GGCGGCGGCA CCCGTGGATG
CTTCACGTCC CCGTATCGGG ACCCCCGTTG ACCCCGCACC AGATCGCCTG GCTGGAACGG
GGTCTCACCT GCCTGGCCGA CACGGGTCTG TCCGAACGGG AGCGACTGTC GGTGGTCATG
ATGGCCTCGG GGCTCGTCCG GGGCTGGGCC AACGTGACCG TCGGCGCGGA CGAGGGACGC
GACCCCGCCT ACTACGCGAC GACCCTGTCC CGGCTGATCG ACCCACTACG GTTTCCGGCC
GTGACGGCGG CGATGGCGGC CGGAGCGATC GACGACGACA CGGACGACCC CGACGAGGAG
TTCCGCTTCC AACTGGAGCG CCTGCTCGAC GGGGTGCAGG CGCTCATCAC CCGCGACTGA
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| Protein sequence | MTDNAASAVP NSLQAAWGVR ERPGFGPRPG LSLDRIVAAA LELAESDGLA AVSMVKVAKA
LDVSTMALYR YVAAKDELLE LMVDAGFGEP PPGPEGADWR EGLAAWVWDC LTAWRRHPWM
LHVPVSGPPL TPHQIAWLER GLTCLADTGL SERERLSVVM MASGLVRGWA NVTVGADEGR
DPAYYATTLS RLIDPLRFPA VTAAMAAGAI DDDTDDPDEE FRFQLERLLD GVQALITRD
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