Gene Snas_3006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3006 
Symbol 
ID8884205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp3172232 
End bp3173446 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content71% 
IMG OID 
Productmonooxygenase FAD-binding protein 
Protein accessionYP_003511770 
Protein GI291300492 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00211074 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCAACC GCACCGCCCT CATCTCCGGC GCCTCCATCG CCGGGCCCGC CCTCGCCTAC 
TGGCTCAACC ACTTCGGCTT CGACGTCACC GTGGTCGAGG CCGCCCCCGC CCCGCGTCCC
GGCGGCTACA AGGTCGACCT GCGTGGTGTC GCCGTCGAGG CCGTCGACCG CATGGGCATC
GGCGAGGCCG TCCGCGCTCG CGACACCGCC ATCCGCGGCG GCCAGTGGGT CACGACCAAG
GGCAAGACCC TGGCCACCCT CGGCCCCGAC CTCATCGGCT TCCGCGATCC CGGCGACCTG
GAGATCATGC GCGGTGACCT CAGCGACCTG CTGCGCGAAG CCACCGAGCG CACCGTCGAA
TACCGCTACG GCGACGTCAT CACCGCCATC GAGGACACCC CGGACGCCGC GATAGTCCAC
TTTCGCCACG CCGCGTCGCA GCGTTTCGAC ATCGTCGTGG GCGCCGACGG CCTCCACTCC
GGAACCCGCG CCGTCGCCTT CGGCCCCGAA GACCGCTACT CGCGTCCCAT CGGCATGAGC
GTCGCCGTCT TCAACGCCCC CAACCGACTC GGCCTCGACC ACTGGGACAT GGCCTGCTCC
GCCACCGGCC ACACCACCAA CCTCTACGCC TTCGGCCCCG ACCAGCCCGC CTACGCGCAG
CTGTTCTTCC CCACCCCGGC CGAGGTGCCC GACCGTCACG ATCGCGCCGC CCAGGAACGC
GTCCTGCGCG AGGCCTTCGG CGGACACGGC TGGGAACTGC CGCACCTGCT CGCCGCGCTG
CCCGAGGCCC CCGAGCTCTA CTTCGACCAC CTGGCACAGA TCCATATGGA CACCTGGACG
AGCGGCCGCA CCGTCCTGCT CGGCGACGCC GCCTACTGCC CGTCCCCGGC CTCGGGACAG
GGCACCGGCA TGGCCTTGGT GGGAGCCCAC GTCCTGGCTC ACGCCCTGGC CGCCGAACCC
GACCACCGCG CCGGGTTCGC CGTGTACGAG CGGCGGATGC GCCACTTCGT CGACATCAAC
CAGAAACTGG GCCGGGACGT GGCCGCCAAA CTCGTGCCCA ACACCCGTTT CGCGGCGATG
GCGCAGCGCG TGATGATGCG GATGCTGCCG TACATGCCCG GCAAGAACGC CGTCCTGGAG
GGCGTCATGA AACCGATCCG CGAGGCCGCC AACGCCATCG CCCTGGACGA GACCGCGCCA
ATGTCGTTGC GGTAA
 
Protein sequence
MTNRTALISG ASIAGPALAY WLNHFGFDVT VVEAAPAPRP GGYKVDLRGV AVEAVDRMGI 
GEAVRARDTA IRGGQWVTTK GKTLATLGPD LIGFRDPGDL EIMRGDLSDL LREATERTVE
YRYGDVITAI EDTPDAAIVH FRHAASQRFD IVVGADGLHS GTRAVAFGPE DRYSRPIGMS
VAVFNAPNRL GLDHWDMACS ATGHTTNLYA FGPDQPAYAQ LFFPTPAEVP DRHDRAAQER
VLREAFGGHG WELPHLLAAL PEAPELYFDH LAQIHMDTWT SGRTVLLGDA AYCPSPASGQ
GTGMALVGAH VLAHALAAEP DHRAGFAVYE RRMRHFVDIN QKLGRDVAAK LVPNTRFAAM
AQRVMMRMLP YMPGKNAVLE GVMKPIREAA NAIALDETAP MSLR