| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2965 |
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| Symbol | |
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| ID | 8884164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 3129745 |
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| End bp | 3132834 |
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| Gene Length | 3090 bp |
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| Protein Length | 1029 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | PKD domain-containing protein |
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| Protein accession | YP_003511733 |
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| Protein GI | 291300455 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.651624 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0385802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAC GGATAGCCTT CGCCATTGTC ATACTGCTGA CCTCGGCGAC ACTGACGGCC
TCGACGGCCA CCGCGGCCCC GCCCGCGGAC TTCGACAAGA CCCTCATCAG CGACGGCCTC
AACGTCCCCA CGGCGTTCCG CTTCGCCTCG GGCGGAAGGA TCCTGGTCGC GGAGAAGGAC
GGCGCCATCC GGCTGATCGT CAACGGCGTC CTGCGTGCCG ACCCGATGAT CACTCTGTCC
ACGGCCGGGG CCGACGAGCG GGGACTGCTC GGCCTGGAAC TGGATCCGGC CTTCGACACC
AACGGCTATG TCTACGTCGG CTACACCCAC ACCGACAACC GCAACCGGCT CAGCCGCTTC
ACCGCCACGG GGTCCACCAT CGACCCCGGC TCGGAACTGG TGCTGCTCCA GTCCGACCAG
GAATCCAATG TGTTCCACCA CGGCGGCGAG ATCCGGTTCG CACCCGACGG CACCCTGTAC
TGGTCGCTGG GGATGAACAC GATCAACGTC AACTCCGAGC AGCTGGGCAA CCTGCACGGC
AAGATCCACC GCATCAACCC CGACGGCACG ATTCCCGGCG ACAACCCCTT CGCCGGGGTG
CCCGGCGCCG AACCGTCCAT CTGGGCCTAC GGGCTGCGCA ACCCGTTCCG CTTCGACCTG
ATCGGCTCCG GCCCCAACGC CGGGCGGCTG TTGTCCGGCG ACGTCGGTGG CTCGGCCTGG
GAGGAGATCA ACCTGATCGA ACGCGGCGCC AACTACGGCT GGCCGAAGGC CGAGGGCTTG
TGCGACGGCT GCCCCTACGC CCAACCGGTC CACACCTACC CGCACACCGC CCCTCCGGCC
AGCGCGGGAT CGATCACGTC GGTGGAGATC TACACCGGCG GCCAGTTCGG AAGCCAGTAC
GACAACGCGG TCTTCTTCGC CGACTACACC CTCGGCTTCA TCAAATACCT CAAGATGGAC
GACGAGTTCC GCAGCGTCAT CTCCGTCAAC GACTTCGACA CCGCCGCGGG AACCCCGGTC
CAGCTGACCA CCGGACCCGA CGGCGCGCTC TATCAGCTCA ACATCTATCC CGGTGAGCTG
TACCGGATCG CGCCCTCGGG CGGCAACCGC GCCCCCGAGG CCAAAGCCGC GGCGTCCCCC
GACAACGGCC TGGCGCCGTT GCGGGTGCGG TTCTCCTCGG CGGGAAGCGA CGACCCCGAC
AACGATCCGA TCAGCTACCG GTGGGACTTC GGCGACGGCA CCACCTCGAC GCGCGCCAAC
CCGTCGCACA CCTTCTTCAG GAACGGGAAG TACCAGGTCA AGCTGACCGT CAGCGACGGC
ACCAAGACCG ACACCGCGAC CGTGCCGGTC CAGGTCGGCA ACCGCAGACC CAGCGCCACC
ATCACCGCCC CGGCCGACGG CTTCAAGTAC GACGCGGGCG ACACGATCTC CTTCGCCGGG
ACCGGAACCG ACCCCGAGGA CGGCAGGCTC GGGCCCGCGT CGATGTCATG GACGGTGATG
TTCCACCACG CCGATCACGT GCACCCGTTC CTGGGGCCTG TGGACGGTGT CGCCTCGGGC
GAGTTCACGA TCCCCAGGGC GCCCGACAAC CTGGCCAACA CCTGGTACCG GATTCACCTG
AAGGTCACCG ACTCCGGCGG ACTGACACGT TCCACCTATG TGGATGTCAA ACCGAACCTG
GTGACGCTGA CGGTCAAGAC CGGCACCCCG GGTCTGTCGT TCACCGTGGA CGGCATCCCG
CACAACGGAA CCCTGACCGA GACCGCGGTG GTGGGGGTGG AGCGCACCCT GGACGTCCCG
CCGTTGCAGT ACGCCAACGA CACCCGCTAC CAGTTCGCCA GCTGGTCGGA CGGCGGCGAC
GCCGCGCACA CCATCGTCAC CCCCGAGCGC GACACCGTCT ACACCGTGGA CTTCACCGAA
CTGCCACGTC CGCCGGATCC GTGGGTCGAG ACCAACGTGG GTGCCCGGAC CCAGGACGGA
TGGGCGTCCT ACAAGGATGG AGAGTTCACC GTCAACGGCT CCGGGTGGGA CATCTGGGAC
ACCACCGACG AGTTCCACTA CGCCAACCGT CCACTGTCGG GCGACGGCCG GATCACCGCG
CGGCTGACAT CCCAGACCGA CACCGACGAC TGGGCCAAGG CCGGGGTCAT GATCAAGGAG
TCCACCCAGG CCGGTGCCCG TTATGCCGCC GTCGCGGTCA CTCCCGACAA CGGCGTCCGC
ATGCAGGCCA ACTTCAACGA GGACGACGGC GGCTTCGCCT ACCAACCCGG AAACGCCTGG
CTGCGGCTGA CCCGCAGCGG GGACACCTTC ACCGCCGAGA CCTCCGACGA CGGAACCAAC
TGGACGAGGA TCGGGACCAC GACCCTGACC ATGGCCAAGG ACGTGACGAT CGGGCTGTTC
TCCACCGCCC ACGACAACAC CGAGTTCTCC AAGGCGGTCT TCGACTCGGT GGACGTGTCG
GGTGTGCCCG GTCCGGTCCC CGAACCGTGG ACCTGCGGTG ACGTCGGCGA TCCGAGACTG
CCCGGCTCGG CGGCCCACGA GAACGGGACC TTCACCATCA CCGGAGCCGG CGACGACATC
TGGGCGACCT CCGACCAGTT CCACTACTGC CACCGGCAAC TGGACGGCGA CGGCCGGATC
ACCGCGCGCG TCACCGGACA GGCCGACACC GACGACTGGG CCAAGACCGG CGTGATGATG
AAACAGTCCA CACAGGCTGG TTCGCCGTAC GTGGCGGCGT TCGTGACCCC GGAGCACGGG
GTGCGGACGC AGACCGGCTT CGACACCGAC ACGGCCGGAA CCCAGACGGG CACACCCGCC
TGGGTCCGGC TGGAACGCGT CGGTGACACC GTCACCGCCT ACGAATCACC CGACGGTCAG
CAGTGGACCG CGATCGCCAC CGCGACACTG TCGGGCCCGG TGACCGTGGG GCTGTTCGTC
ACCTCCCACA ACGGAAGCGT CCCCAACACG AGCACCCTCG ACTCGGTCGA CGTCGACGGC
CCGGCGGAGG TGGAAGCGAG CTTACACAAT GGAATGACGT CCGGATCCCG TGAAGATCAA
GGCTGTGGGC CCTTGATATT CGGGCCCTGA
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| Protein sequence | MFKRIAFAIV ILLTSATLTA STATAAPPAD FDKTLISDGL NVPTAFRFAS GGRILVAEKD
GAIRLIVNGV LRADPMITLS TAGADERGLL GLELDPAFDT NGYVYVGYTH TDNRNRLSRF
TATGSTIDPG SELVLLQSDQ ESNVFHHGGE IRFAPDGTLY WSLGMNTINV NSEQLGNLHG
KIHRINPDGT IPGDNPFAGV PGAEPSIWAY GLRNPFRFDL IGSGPNAGRL LSGDVGGSAW
EEINLIERGA NYGWPKAEGL CDGCPYAQPV HTYPHTAPPA SAGSITSVEI YTGGQFGSQY
DNAVFFADYT LGFIKYLKMD DEFRSVISVN DFDTAAGTPV QLTTGPDGAL YQLNIYPGEL
YRIAPSGGNR APEAKAAASP DNGLAPLRVR FSSAGSDDPD NDPISYRWDF GDGTTSTRAN
PSHTFFRNGK YQVKLTVSDG TKTDTATVPV QVGNRRPSAT ITAPADGFKY DAGDTISFAG
TGTDPEDGRL GPASMSWTVM FHHADHVHPF LGPVDGVASG EFTIPRAPDN LANTWYRIHL
KVTDSGGLTR STYVDVKPNL VTLTVKTGTP GLSFTVDGIP HNGTLTETAV VGVERTLDVP
PLQYANDTRY QFASWSDGGD AAHTIVTPER DTVYTVDFTE LPRPPDPWVE TNVGARTQDG
WASYKDGEFT VNGSGWDIWD TTDEFHYANR PLSGDGRITA RLTSQTDTDD WAKAGVMIKE
STQAGARYAA VAVTPDNGVR MQANFNEDDG GFAYQPGNAW LRLTRSGDTF TAETSDDGTN
WTRIGTTTLT MAKDVTIGLF STAHDNTEFS KAVFDSVDVS GVPGPVPEPW TCGDVGDPRL
PGSAAHENGT FTITGAGDDI WATSDQFHYC HRQLDGDGRI TARVTGQADT DDWAKTGVMM
KQSTQAGSPY VAAFVTPEHG VRTQTGFDTD TAGTQTGTPA WVRLERVGDT VTAYESPDGQ
QWTAIATATL SGPVTVGLFV TSHNGSVPNT STLDSVDVDG PAEVEASLHN GMTSGSREDQ
GCGPLIFGP
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