| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2958 |
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| Symbol | |
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| ID | 8884157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 3120224 |
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| End bp | 3123118 |
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| Gene Length | 2895 bp |
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| Protein Length | 964 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003511726 |
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| Protein GI | 291300448 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.500488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00113225 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTGATCC GGCTGTTGGG CTCCGTGGAG GTCGCGGGCG AGCACGGTTG GGTGCGGGCG
GGTCCGTCGA AACAGTCCTG CGTGCTGGCG GCCCTGGCGA TGACACCGGG TCAACCGGTC
GCCACGGCCG CGCTGCTGCA ACGGGTGTGG GGTGACGACC CGCCGGACAA GGTGTTCAGC
ACCCTGTACT CGTATCTGGC CCGGCTGCGG CGGCTGCTCC AGCATGACGG CGTCGCGCTG
ACGCGGGCCG GAAACGACGG CTATCAGCTG GTCATCGAAC CCGAGGACAT CGACCTGATC
GCGATGCGGC GCCTGGTGAC CCGGGCGCGC GAGGCGGCGC GCGCCGGTGA CCACGAGACC
GCCGTCCGGG ATTACCGCGA AGCCTGTTCG CTGTGGACCG GTGAGGCGCT GGCCACGGTG
GACGGACACT GGGCGTCGCA GACGCGAGAG GCGTTGCGGC GCGAGCAGCT GGCGGTGCTG
TCGGCGTTGT TCGACTCGGA GTTGGCGCTG GGTTACCACG AGTCCGTCAT CCCCGAGCTT
GAGGAACTGG TCGGCAGACA CCCGCTGGTG GAGTCACTGG TCGCGCAGCT GATGTTGGCG
TTGTACCGCG CCGACCGTCC CTCCGACGCC CTGGCGCGCT ACGCCGAGAC CCGGAAACTG
TTGCGGGAGC GGCAAGGCGC CGAACCCGTG GAGCGCCTGC GGCGGTTGCA CAAACGCATC
CTGAGTCACG ACCCCGAACT GCGGCACGTC ACCGACAGTC CCGCCGTGGT GTCCGGTCGG
GAGACACCGG CGCAGCTGCC CGCCGACACC ACCGCCTTCA CCGGCCGGGA ATCGCCACTG
CGGACGCTTG TGGACGCGGC CGACGATTCG CGGGTCATCG TCGTCGACGG GATGGCCGGG
ATCGGCAAGA CCACGCTGGC GGTGCACGCG GCGCGGCGGC TGGCCGAGCG CTACCCCGAC
GGTCAGCTCT ACCTGAATCT GCACAGTTTC ACCGACTCGG TGCCGCCGAT GGCTCCCGCC
GAGGCGTTGT CGGCACTGCT GGATTCGCTG GGAGTGCCAC GAAACGCCAT CCCGGAGAGT
GTCGACGCGC GGGCCGCCAA GTTCCGGTCC ATGCTGGCCG GACGGCGAGT ACTCCTGTTG
CTCGACAACG CCCGCGACGA GGCCCAGCTG TCGCCGTTGC TGCCGGGTGA TTCGGGGTGC
CTGACCATCA TCACCAGCCG CAGACGGCTG TCCGGTCTGG ACGACATCCG GCCGATCTCG
TTGGAGCCGC TGGACTTGGA ACCCTCGGCG CGGCTGTTCG CCGCCGCCGC GGGGATTGAC
GATCTCAACG ACGACGACCG GGCCGCGATC GACCGCGTCG TGGAACTGTG CGGCGGTCTG
CCGCTGGCGA TCAGGATCGC GGCGGCCCGG CTGCGCAGCC GTCCCACGTG GTCGGCGGCC
GATCTGCTGG AGCGGTTGTC CAAGGACTAC CGCCTGCTGG ACGAACTGGC GGCCGGTTCC
CGCAGTGTCG CCTCCACCCT CGGACTGTCC TATCGCGAGT TGACTGACGG GCAGCGTCGC
CTGTTCCGGC TGCTGGCACT GTGTCCCGGC AGCGATTTCG ACGCGGCCAC CGCCGCCGCG
CTGGCGGGTG CGCCGGTCGA CGCATTGCTC ACCGACCTGG ACGCCCTGGT GGACGTCAGC
CTGGTCGACG CCGAACCCGG TGGCCGCTAC CGGATGCACG ACCTCATCCG CCGGTTCGCC
GCCGAGGCGC TGGCCCGCGA CGAACGCGAC GTCCTCGCTC CGGTCGGCCG GTTGCGCGAC
CACTACCTGC ATCACGCTCA CGCCGCCATC AAGGTGTTGG ATCCCGACAT CGCGCGGTTG
CCGGACCTGC CGCCACCGCC GCCGGGCATC ACGCCACCGC TCCTGGACGG GCACGCGGCG
GCGCTGTCCT GGTTCGCCGC CGAGGAAACG GCGCTGCTGA GTCTTCTGTC CACATCGGTG
GCCGACGCGC CCGGTCTCGT CCTCGATCTG GCGGCCTGTG TGCTGCCCTA CCTGCGCGAC
CATTCCCCCT CGACCGAACA GCCCGCGGTC GCGTCGCTGG CGGTGCGGGC CTCCCGCTCC
AAAGGCGACA CCCAGCGGCA GGCGGTATGG CTCAATCTGC TGGGCAACGC GCATCTGACG
GCGGCCCGGT TCGCACCGGC GGTGGACTGC TATACCGAGG CCCTGGAGAT TCACGACAGT
ATCGGCAACG TGTCCGGCGC GGCCTCGGTT CACGGCAATC TCGGTGTCGT CCACAAGGAA
CTCGGCAACT ACCAGCGGTC ACTGTCGCAC CTGGAACGGG CGGCGGAGCT GGCGGCGACG
GCCGGCGACA CCGTGTCGCT GGCCATCGCC GAGTCCAACG CCTGCGAAGT CCATGTGCGG
TTGGGAAACC CGTCCCGGGG AAGGGAACTG GCGGAATCGG CGATGGAACG GTTCCGGGAG
CTCGACCGGC CGCTACTGCT GGCCCAGACC CTCGACAATC TGGCGATGGC GTATCTCTCC
GAGGGACGAC TGGCCGACGC CCGCCGCGTC GAGGAGGAGG CCGTCGACTA CGGACGACGC
CACGACGCCG TCGAGGTACT GGTCCAGGCC CTGAACCGAC TGGGTGCCAT CCTGCGGGAG
CAGAACGAAC TGCCGGACGC GCTTGAGCGG CACCGGCAGG CGCTGGCACT GCTGTCGCCG
GACGCGCGGC CCGTCCTGGA GACCGGCATC CGCTGCGAGT ACGGCCGGAC CCTGCTGGCC
TGCGGTGACC CCGAGGCGGC GCTGGCGCAG TTTCGGCAGG CGGCGGAGCT GGCCAGCCAG
GCCGGGCAGC GCTACGAACT GGCCCTGGCG CGGCACGGTA TCGCCGACGC CCTCCGCGCC
AGACCGACTG CCTGA
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| Protein sequence | MLIRLLGSVE VAGEHGWVRA GPSKQSCVLA ALAMTPGQPV ATAALLQRVW GDDPPDKVFS
TLYSYLARLR RLLQHDGVAL TRAGNDGYQL VIEPEDIDLI AMRRLVTRAR EAARAGDHET
AVRDYREACS LWTGEALATV DGHWASQTRE ALRREQLAVL SALFDSELAL GYHESVIPEL
EELVGRHPLV ESLVAQLMLA LYRADRPSDA LARYAETRKL LRERQGAEPV ERLRRLHKRI
LSHDPELRHV TDSPAVVSGR ETPAQLPADT TAFTGRESPL RTLVDAADDS RVIVVDGMAG
IGKTTLAVHA ARRLAERYPD GQLYLNLHSF TDSVPPMAPA EALSALLDSL GVPRNAIPES
VDARAAKFRS MLAGRRVLLL LDNARDEAQL SPLLPGDSGC LTIITSRRRL SGLDDIRPIS
LEPLDLEPSA RLFAAAAGID DLNDDDRAAI DRVVELCGGL PLAIRIAAAR LRSRPTWSAA
DLLERLSKDY RLLDELAAGS RSVASTLGLS YRELTDGQRR LFRLLALCPG SDFDAATAAA
LAGAPVDALL TDLDALVDVS LVDAEPGGRY RMHDLIRRFA AEALARDERD VLAPVGRLRD
HYLHHAHAAI KVLDPDIARL PDLPPPPPGI TPPLLDGHAA ALSWFAAEET ALLSLLSTSV
ADAPGLVLDL AACVLPYLRD HSPSTEQPAV ASLAVRASRS KGDTQRQAVW LNLLGNAHLT
AARFAPAVDC YTEALEIHDS IGNVSGAASV HGNLGVVHKE LGNYQRSLSH LERAAELAAT
AGDTVSLAIA ESNACEVHVR LGNPSRGREL AESAMERFRE LDRPLLLAQT LDNLAMAYLS
EGRLADARRV EEEAVDYGRR HDAVEVLVQA LNRLGAILRE QNELPDALER HRQALALLSP
DARPVLETGI RCEYGRTLLA CGDPEAALAQ FRQAAELASQ AGQRYELALA RHGIADALRA
RPTA
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