| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2767 |
|---|
| Symbol | |
|---|
| ID | 8883965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2912074 |
|---|
| End bp | 2913714 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | TAP domain-containing protein |
|---|
| Protein accession | YP_003511536 |
|---|
| Protein GI | 291300258 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGA TGATGACCGT CGCGGCGGCG GTGTCCATAC TGGTGGTCGC GGGTTGCGGC
ACCGGCGGCG AGACCGCCGA CACCGCGAAC CTGAAGCGCT TCCACGACCA GGACGTCGAC
TGGAAGCCTT GCCCGCCCGA CCTGAAGGCC CTCGGCATCA CCGACCTCGA CGAGAAGCAG
CGCGCGCTCC TGGACACCCG CGAGTGCGCC AGCGTCGAGG TGCCCGTCGA CTATCGCGAT
CCCGACGGCG AGCGTTTCAC GCTGCCGCTG GCCCGCATCC CGGCCGCCGA CCCCGAAAAG
CGGGAGGGTT CGCTGCTGCT GGCATCCGGC GGTCCCGGGC TCGGCGGGGT CGACAACACG
ATCCAACGCC CGCTGACCAA TCCGTCCCTG GTGCAGAAGT ACGACCTGGT GGGTTTCGAC
CCGCGCGGCG TGGGCAAGAG CGAACCGGCC ATCACGTGTC TGGACGACGA GCTGGTGAAG
AAACAGGTCG AGGTGGACAC GTCTCCGGAC ACCGAAGCGG AGATCGAATC CCTGGTGGCG
TTCCAGGAGG ACTTCACCGA CGGCTGCCGC AAACGCTCGG GCGACATCCT CGAACACGTC
GGGACCGTCA ACGTCGCCCG CGACCTGGAC ATCGTCCGTG AGGTCCTGGG CGACAAGACT
CTCAACTACT ACGGCGTCTC CTACGGGATC CAACCCGGCG CGATGTACGC CGAACTGTTC
CCGAAACACA CCGGCCGCAT CGTGCTGGAC GCTCCCGGCC CGATCCTGCT CGACTTCGAG
GAGTCGATGC GGCAGCAAAC CAAGGGCATC GAACTCGGCC TGGAACGCTT CGCCGACAAC
TGCGTGGCCG ACAACTCCTG CCCGCTGGGA GACGACCGCG ACGCAGTCCT CGACGGACTG
TCCACACTCT TCGATGAACT CGACGCCAAA CCCATGCCCG CCGCCGATGG GGCGTCACTG
ACCGAGGCCG ACGCCCGAAT GGCGATCGCC ATCGGCGTCT ACGATCCGCA CGGCTGGCCG
AAACTGGAAC AGGCGCTGTC CGACGCGACC GACGGCGATC CCGCCGGGCT GTACGCGATG
GCCGGTGTGA TGGCTGGTCG CGACGCCAGC GGCGGGTACT CCAACTTCTG GGAGGCCAAC
ACCGCCGTCA ACTGCGTCGA CTACCCCGAC ACCCACGACC AAGGCGACGT CGAGAAACTC
GCCAAGGAAT TCGACAAACT CTCACCCCGG TTCGGCATCG GCAACGCCTG GCGGCTGAAC
GAATGCGCGA CCTGGCCCAA GGGCGAGGGC CGCACCAAGG AACTCAACGG CAAGGGTGCG
AAACCCATCC TCATCCTCGG CAACACCGGC GACCCCGACG CGATCTACGC ATTCGCCGAG
CAACTGGCCG AATCCCTGGA ATCGGCGCGG CTGCTGACCT ATCACGGTGA AGGCCACGGC
GCCTACGGCG AAGGCAACGA CTGCGTCGAC GGCACAGTGG ACAAGTTCCT TCTCGACGGA
ACCGATCCGG GCGAGGCCGC GACGTGCCGG GGCTTAGACG CCCCGGCCGT CGCGGCCGGG
CGGGTTCACT TCTTCGGCGG GAACCGCACG ATCATGTCGC CGTTGGGCTG CTCCCGGTCG
CTGGTGGCCA CCCACAGGTA G
|
|---|
| Protein sequence | MSKMMTVAAA VSILVVAGCG TGGETADTAN LKRFHDQDVD WKPCPPDLKA LGITDLDEKQ
RALLDTRECA SVEVPVDYRD PDGERFTLPL ARIPAADPEK REGSLLLASG GPGLGGVDNT
IQRPLTNPSL VQKYDLVGFD PRGVGKSEPA ITCLDDELVK KQVEVDTSPD TEAEIESLVA
FQEDFTDGCR KRSGDILEHV GTVNVARDLD IVREVLGDKT LNYYGVSYGI QPGAMYAELF
PKHTGRIVLD APGPILLDFE ESMRQQTKGI ELGLERFADN CVADNSCPLG DDRDAVLDGL
STLFDELDAK PMPAADGASL TEADARMAIA IGVYDPHGWP KLEQALSDAT DGDPAGLYAM
AGVMAGRDAS GGYSNFWEAN TAVNCVDYPD THDQGDVEKL AKEFDKLSPR FGIGNAWRLN
ECATWPKGEG RTKELNGKGA KPILILGNTG DPDAIYAFAE QLAESLESAR LLTYHGEGHG
AYGEGNDCVD GTVDKFLLDG TDPGEAATCR GLDAPAVAAG RVHFFGGNRT IMSPLGCSRS
LVATHR
|
|---|
| |