| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2720 |
|---|
| Symbol | |
|---|
| ID | 8883918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 2858269 |
|---|
| End bp | 2859375 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | Uroporphyrinogen III synthase HEM4 |
|---|
| Protein accession | YP_003511489 |
|---|
| Protein GI | 291300211 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.210642 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGC CGCTGACCGG TTACACCGTG GCCGTCACGG CGCAGCGCCG GGGCGAGGAG
CTGGCGGCGC TGTTGGGTCG GCGCGGCGCC AAGACGGTGC TGGCGCCGGT GCTGCGGATG
GTGTCGCTGC CCGACGACCA GGCGCTGCGG GCCGCGACGG TGGAGCTGAT CAACGATCCG
CCCGACGTCA CGATCGCGAC CACCGGCATC GGTTTCCGGG GCTGGCTGGC CGCCGCCGAG
GGCTGGGGGC TCGGCGAGGC GCTGCACGCC GCGCTGGGCA GCGGCAGGGT GTGGTGCCGG
GGCCCCAAGG CGCTGGGGGC GGTGCGGGCG GCGGGATTGC GCGAGGAATG GTCGGCGCCC
AGCGAATGCG GCTGGGAGGT GTCGGAGCGG CTGCGCGGCG AACCGCTGTC GGGCCAACGG
GTCGCGGTCC AGTTGCACGG CGACCCCAGC GACGACTTCA CCGACACGAT CCGCTCCGGC
GGCGGCCACG CGGTGCCGAT CCCGGTGTAC CGCTGGATGT TGCCCACCGA CATCACGCCG
GTGCGGCGGC TGGTGGATCA GGTGTGTCTG CGCCGGATCG ACGCGGTCAC GTTCACCAGC
GCGCCCGCCG TCAACGCGCT GCTGCGCATC GCCGGTGACC AGCGCACCGA ACTGCTGGCC
GCGCTGCGGG CCCCGGCCGA CGACGGCGGG GTCATGGCCG CCGTCGTCGG CCCGGTCACG
GCGGCGCCGC TGACGAGAGA CGAGGTGCCG GTGGTGATGC CGGAGCGGGC GCGGCTGGGT
TCACTGGCAC GGCTGGTGAC CGCCGAGCTG CCGGGCCGGG CGTCGCGACT GACGCTGGCC
AGCGGGCACA CCGTGGAGCT GCGCGGACAT CTGGTGATGG TGGACGGTCA GGTGCAACCG
CTGCCGCCCG CGCCGATGGC GATCCTGCGG GCGCTGTCGG CGGCCAAGGG CCGGGTGCTG
ACCCGCACCG AACTGCTGCG GTGCCTGCCC CGGGGCTGTG ACCGGCACGC GGTGGAGATG
GCGGTCACCC GGCTGCGGGA CGGCCTGGGG CTGCGCAGCT GCGTCCAGAC CGTCATCAAA
CGCGGCTACC GGCTGAACCT GCTGTGA
|
|---|
| Protein sequence | MTGPLTGYTV AVTAQRRGEE LAALLGRRGA KTVLAPVLRM VSLPDDQALR AATVELINDP
PDVTIATTGI GFRGWLAAAE GWGLGEALHA ALGSGRVWCR GPKALGAVRA AGLREEWSAP
SECGWEVSER LRGEPLSGQR VAVQLHGDPS DDFTDTIRSG GGHAVPIPVY RWMLPTDITP
VRRLVDQVCL RRIDAVTFTS APAVNALLRI AGDQRTELLA ALRAPADDGG VMAAVVGPVT
AAPLTRDEVP VVMPERARLG SLARLVTAEL PGRASRLTLA SGHTVELRGH LVMVDGQVQP
LPPAPMAILR ALSAAKGRVL TRTELLRCLP RGCDRHAVEM AVTRLRDGLG LRSCVQTVIK
RGYRLNLL
|
|---|
| |