Gene Snas_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2438 
Symbol 
ID8883633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2586492 
End bp2587724 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003511214 
Protein GI291299936 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.658373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACTCCG CCCAGCTGGT GCTCGTGGAG AGCAACACCA CCGGCACCGG CCGTCTCTTC 
GCCTCCAGCG GACGCGCCCT CGGACTGCGT CCGGTGCTGC TGGCCGCCGA CCCGTCCCGC
TACCCGTACG TGATCGAGGA CGGCCTGGAG TGCATCACAG TGGACACCTC CGATCCCGCC
GACGTGCACG CCGTATGCGT CGGACTCGAC AAACAGGCGC CGATCGCGGC GGTGCTGTCC
AGCAGCGAGT ACTTCGTGGC CGCCGCGGCC CGACTGGCCG CCGAGTTCGG GCTCCCCGGC
CCGGCACCCG AGGCCATCGA ACGCTGCCGT GACAAGACCG CGCAGCTCAA GGCCCTGGAC
GGCGCCGTCG CCGTGCCCCG CTACGCCGAA TGCGCCACCG CCGAGGCAGC CGAGACCGCC
GCGAAGGAAC TGGGCGGCGA CGTGGTCGTC AAACCCTGCC TGGGCTCGGG CTCCGAGGGA
GTGCGCGCCT GCGCCGACCC CCGGGAGGCC GCCGACTGGG CCGCGACGCT GCTTGCCAAG
CGCCACAACG AACGCGGCGC CCCGATCGAA CCACGGGTAC TGGTCCAGGA ACGCGTCGAC
GGCCCCGAGT ACTCGGTGGA ACTGCTCGAC GGTGAGGTCG TCGGCATCAC CGCCAAACAC
CTGGGCCGAC CGCCGTTCTT CGTCGAGACC GGACACGACT TCCCGGCCGC CCTGCCGCCG
GACCGCGACG CGGCGATCGC CGCGTCCGCC CGCGCCGCCG TCGCCGCCCT CGACCTGCTG
ACCGGCCCCG CCCACGTCGA ACTGCGCTAC GGCGCGGACG GTCCCGTGCT CATCGAGGTC
AACCCCCGGC TGGCCGGGGG CATGATCCCG CAGCTGGTCA AGCTCGCCAC CGGCTTCGAC
CTCATCACCG CCGTGGTGGC CGGGGCCTCG GGTGCGCCCG CCCGCCCCGA GGACCTCGCC
GGACACCACG CCGCCATCCG GTTCCTGGTC CTGGACCGGG ACGGCACCAT CACCGCCGTC
GACGGTGTCG ACAACGCCTG GGAAACCCCC GGCGTCGTGG AGGTCGCGAT GATCGCGCGA
CCCGGCGAGG ACCGCGCTCG ACACCACTCG TTCCGGGACC GGCTCGGCTA CGTCATCGCG
ATCGGCGAGA CCACCGCCGA CGCCGCCACC GCCGCCGAGG CCGGACGCGA CGCCGTGCGC
GTCGCACTCG CCGAAACGGG AGAGACACCA TGA
 
Protein sequence
MNSAQLVLVE SNTTGTGRLF ASSGRALGLR PVLLAADPSR YPYVIEDGLE CITVDTSDPA 
DVHAVCVGLD KQAPIAAVLS SSEYFVAAAA RLAAEFGLPG PAPEAIERCR DKTAQLKALD
GAVAVPRYAE CATAEAAETA AKELGGDVVV KPCLGSGSEG VRACADPREA ADWAATLLAK
RHNERGAPIE PRVLVQERVD GPEYSVELLD GEVVGITAKH LGRPPFFVET GHDFPAALPP
DRDAAIAASA RAAVAALDLL TGPAHVELRY GADGPVLIEV NPRLAGGMIP QLVKLATGFD
LITAVVAGAS GAPARPEDLA GHHAAIRFLV LDRDGTITAV DGVDNAWETP GVVEVAMIAR
PGEDRARHHS FRDRLGYVIA IGETTADAAT AAEAGRDAVR VALAETGETP