Gene Snas_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2427 
Symbol 
ID8883622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2575010 
End bp2575687 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content71% 
IMG OID 
ProductAbortive infection protein 
Protein accessionYP_003511203 
Protein GI291299925 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.856129 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCATTC TTGGCTCGCT GGCCGCCGTC ACGGTCCTCA ATAGAATCGG ACCGGGCGGC 
ACCGGCGTCG TCGTCGAACC CCTGGTGGCC GTCGCCCTGA TCGTGCTGGC CCGCTGGCAC
GGACTGACCT GGCACGACCT CGGCCTGTCC CGCCGCACCT GGGGCAAGGG CCTCAAGTGG
GCCAGCCTGG CCATCGCCGC CGTCGCGGCC GTCTACCTGA TCGGCGCCCT GCTCCCCCTC
ACCCGCGACG CCTTCGTCGA CTCCCGCTAC CAGCTCGGCA CCGGCACCGC CCTGCTCACC
GGCTTCGTGC TCATCCCGCT GGGCACCATC GCGTTGGAGG AGGTCGCGTT CCGGGGCGTC
CTCATGGGTG TGCTCGGCAA GCGCAAGGGC GTCACCCTCG CGATCTCCGT TTCATCGGTC
CTTTTCGGAC TGTGGCACGT ACTGCCGTCG CTGGCCATGG GCGCCAACAA GCTGGTCGCC
TCGATCGTCG GCCCCGGCCT GCTGGCCCGC GTCATCATGG TGGCCGCCGT CGTGGCGTTC
ACCGGCGCCG CCGGTTGGCT GCTGTGCGAG GTACGCCGAC GCTCCGGCAG CCTGCTGGCC
CCCATGGGCC TGCACTGGGC CACCAACGGC CTGGGCGTGC TGCTGACCAG CGCTCTGTGG
TCGCTGCGCG TCGTGTGA
 
Protein sequence
MVILGSLAAV TVLNRIGPGG TGVVVEPLVA VALIVLARWH GLTWHDLGLS RRTWGKGLKW 
ASLAIAAVAA VYLIGALLPL TRDAFVDSRY QLGTGTALLT GFVLIPLGTI ALEEVAFRGV
LMGVLGKRKG VTLAISVSSV LFGLWHVLPS LAMGANKLVA SIVGPGLLAR VIMVAAVVAF
TGAAGWLLCE VRRRSGSLLA PMGLHWATNG LGVLLTSALW SLRVV