Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2422 |
Symbol | |
ID | 8883617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2568800 |
End bp | 2570887 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | transketolase |
Protein accession | YP_003511198 |
Protein GI | 291299920 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.635984 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTAAGT CCCTGGAGTG GACAGACCTG GATCGACGTG CGGTGGATAC GGCCCGGGTA CTGGCCGTGG ACGCGGTGGA GAAGGCCGGA AACGGTCACC CGGGGACGGC GATGAGCCTG GCCCCGGCCG CGTACCTGTT GTTCCAGCGG GTGATGCGTC ACGACCCCTC CGAGCCGGCC TGGGCCGGAC GGGACCGGTT CGTCCTTTCG TGTGGACATT CGAGCCTTAC GCTCTACATC CAGCTGTACC TCGCCGGTTT CGGCCTGGAG CTGGACGATC TGAAGTCGTT GCGGCAGTGG GGTTCGCGCA CGCCCGGTCA CCCTGAGTTC GGGCACACCG CCGGTGTGGA GACCACCACC GGTCCGCTGG GCCAGGGCAT CGCCACCGCC GTGGGCATGG CGATGGCCGC GCGCCGCGAG CGCGGGCTGT TCGACCCCGA GGCCGCGCCG GGCACCTCCC CCTTCGACCA CCACGTGTAC GTGGTCTGCT CGGACGGCGA CATCGAGGAG GGCATCAGCC ACGAGGCCAG CGCGCTGGCC GGGGTGCAGG ACCTGGGCAA CCTGATCGTC CTGTACGACG ACAACCAGAT CTCCATTGAG GACGACACGA ACATCGCGTT GTCGGAGGAC GTCAACGAGC GCTACGCCGC CTACGGCTGG CACACCCAGA CCGTGGACTG GCGGCCCGGC GGCAAGCACG CCGAGGACGT CGACGCCCTG TACCAGGCCA TCGAGAAGGC CAAGCGGGTC ACCGACAAGC CGTCGTTCAT CTCGCTGAAG ACCATCATCG GCTGGCCCGC CCCCAACAAG CAGAACACCG GCGGCATCCA CGGCTCCAAG CTGGGCACCG ACGAGGCCGC CGAGACCAAA CGCATCCTGG GCTTCGACCC GGAGCAGTCC TTCGAGGTCA CCGACGAGGT CATCGGGCAC ACCCGCGGCG CCGTCGACCG GGGCCGCGCC GAGCGCGAGC GCTGGCAGTC GGACTTCGAC GCCTGGGCGC AGGCCAACCC GAAGCGCGCC GAACTGTACG AACGCGTGTC GCGTCGTCAG CTGCCGCCGG AGTGGGAGAA GTCGCTGCCG GTGTTCGAGC CCGACGCCAA GGGCGTGGCC ACCCGCGCCG CGTCCGGGAA GGTGCTGTCG GCGCTGGCCG ACACGCTGCC GGAGCTGTGG GGCGGTTCGG CCGACCTCGC GGGCAGCAAC AACACCACGA TGGACGGTGA GCCGTCGTTC CTGCCCGAGG CCCGGGCGAC CAAGAAGTTC CCCGGCAACC CGTACGGGCG CACGCTCCAC TTCGGTATCC GCGAGCACGC CATGGGCGCG ATCTGCAACG GCATCGCGCT GCACGGCGGC ACCCGCCCCT ACGGCGGCAC CTTCCTGGTG TTCAGCGACT ACATGCGGCC AGCCGTACGG CTGGCGGCGC TGATGCAGCT GCCGGTGGTG TTCGTGTGGA CGCACGACTC GATCGGGCTT GGCGAGGACG GTCCGACCCA CCAGCCCATC GAGCACCTGG CGGCGCTGCG CGCGATGCCG GGCCTGGACG TGGTGCGTCC GGCCGACGCC AACGAGACCG CGTGGGCGTG GCGGCAGGCG CTGGAGCACA CCGACCGGCC CACCGGCCTG GCGCTGACCC GGCAGAACGT CCCCACCTGG GACCGCACCG AGTTCGGCAG CGCCGAGGGC ACGGTGCGCG GCGGCTACGT GCTGGCCGAG GCCGACGGCG GCAAGCCGCA GGTGATCCTC GTGGGCACCG GCAGCGAGGT GCAGCTGGCG GTTCAGGCGC GCGAGACGCT GCAGGCCCAG GGCATCCCCA CCCGCGTGGT GTCGATGCCG TGCCTGGAGT GGTTCGACGC CCAGGAGCAG TCCTACCGCG ACAGCGTGCT GCCGCCCAAC GTCAAGGCCC GCGTCAGCGT CGAGGCCGGG ATCGCCATGC CGTGGCGGCA CCTGGTCGGC GACGACGGCG CGAGCGTCAG CATCGAGCAC TTCGGCGCGA GCGCGCCCTA CGAGCGCATC TACGAGGAAT TCGGCGTCAC CGCCGAGGCC GTCGTCACCG CGGCGAAGCG CAGCCTCGAC AACGTCAACA ACCACTAA
|
Protein sequence | MAKSLEWTDL DRRAVDTARV LAVDAVEKAG NGHPGTAMSL APAAYLLFQR VMRHDPSEPA WAGRDRFVLS CGHSSLTLYI QLYLAGFGLE LDDLKSLRQW GSRTPGHPEF GHTAGVETTT GPLGQGIATA VGMAMAARRE RGLFDPEAAP GTSPFDHHVY VVCSDGDIEE GISHEASALA GVQDLGNLIV LYDDNQISIE DDTNIALSED VNERYAAYGW HTQTVDWRPG GKHAEDVDAL YQAIEKAKRV TDKPSFISLK TIIGWPAPNK QNTGGIHGSK LGTDEAAETK RILGFDPEQS FEVTDEVIGH TRGAVDRGRA ERERWQSDFD AWAQANPKRA ELYERVSRRQ LPPEWEKSLP VFEPDAKGVA TRAASGKVLS ALADTLPELW GGSADLAGSN NTTMDGEPSF LPEARATKKF PGNPYGRTLH FGIREHAMGA ICNGIALHGG TRPYGGTFLV FSDYMRPAVR LAALMQLPVV FVWTHDSIGL GEDGPTHQPI EHLAALRAMP GLDVVRPADA NETAWAWRQA LEHTDRPTGL ALTRQNVPTW DRTEFGSAEG TVRGGYVLAE ADGGKPQVIL VGTGSEVQLA VQARETLQAQ GIPTRVVSMP CLEWFDAQEQ SYRDSVLPPN VKARVSVEAG IAMPWRHLVG DDGASVSIEH FGASAPYERI YEEFGVTAEA VVTAAKRSLD NVNNH
|
| |