| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2363 |
|---|
| Symbol | |
|---|
| ID | 8883558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2502807 |
|---|
| End bp | 2503886 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | tRNA(5-methylaminomethyl-2-thiouridylate)- methyl transferase |
|---|
| Protein accession | YP_003511141 |
|---|
| Protein GI | 291299863 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.68472 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGCG GCGTCGACTC CGCGGTGGCC GCCGCCCGTG CCGTGGCGGA CGGCCACGAC
GTCACCGGCG TGCACCTGGC CCTGTCCAGC AACCCGCAGA CCTTCCGGTC CGGGGCCCGG
GGCTGCTGCA CGCTGGAGGA CTCCCGCGAC GCCCGCCGCG CCGCCGACGT CATCGGCATC
CCCTTCTACG TGTGGGACAT GGCCGAGCGG TTCCGCGAGG ACGTCGTCGA CGACTTCGTC
GCCGAGTACG CCGCCGGGCG CACCCCCAAC CCGTGCCTGC GCTGCAACGA GAAGATCAAG
TTCGCCGCCG TGCTCGACCG GGCGGTGGCG CTGGGCTTCG ACGCCGTGGT CACCGGCCAC
CACGCCCGGC TCGCCGACGG AGTGCTGCGC CGCTCGGTCG ACCTCGGCAA GGACCAGTCC
TACGTGCTGG CGGTGCTCAA CGCCGCCCAG CTGTCGCGGG CGGTCTTCCC GCTCGGCGAC
TCCACCAAGG ACGAGGTGCG GGCCGAGGCC GCCCGCCGCG ACCTCGCCGT GGCCGACAAA
CCCGACAGCC ACGACATCTG CTTCATCGCC GACGGCGACA CCCAGGGCTT CCTCAACCAG
CGGCTGGGGT CCAAGACCGG TGACATCGTC GACGCCGCCT CCGGTGAGGT GCTGGGCTCC
CACTCCGGCG CCCACCAGTT CACCATCGGG CAGCGCCACG GCCTGGGCAT CGGCCGCCCC
GCCGCCGACG GCAAGCCGCG CTACGTCCTG TCGATCACGC CGGTCGACAA CACCGTGAAA
GTCGGCCCCC GCGAGGCGCT CGACGTCCAC GTCGTGCACG CCGACAGGCC AGTGTGGCTG
GACGGCGTGG AGCGCGAGGG CCCGTTCGAG TGCCAGGTAC AGCTGCGCGC CCACGGCGAA
GTGCACGACG CGACCGTCAC CAGCGACGGT GACACCATCA CCGCGCGGCT CCACAGCCCG
GCCAAGGGCG TGGCGGCCGG TCAGGCACTG GTGGTGTACC AGCCCGACCC CGAGGGCGAC
ATCGTGCTGG CCAGCGCCAC CATCGCCCGC ACCGAAGCGC TCGCGCCCGC CGATGTCTGA
|
|---|
| Protein sequence | MSGGVDSAVA AARAVADGHD VTGVHLALSS NPQTFRSGAR GCCTLEDSRD ARRAADVIGI
PFYVWDMAER FREDVVDDFV AEYAAGRTPN PCLRCNEKIK FAAVLDRAVA LGFDAVVTGH
HARLADGVLR RSVDLGKDQS YVLAVLNAAQ LSRAVFPLGD STKDEVRAEA ARRDLAVADK
PDSHDICFIA DGDTQGFLNQ RLGSKTGDIV DAASGEVLGS HSGAHQFTIG QRHGLGIGRP
AADGKPRYVL SITPVDNTVK VGPREALDVH VVHADRPVWL DGVEREGPFE CQVQLRAHGE
VHDATVTSDG DTITARLHSP AKGVAAGQAL VVYQPDPEGD IVLASATIAR TEALAPADV
|
|---|
| |