| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2271 |
|---|
| Symbol | |
|---|
| ID | 8883465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2414428 |
|---|
| End bp | 2415000 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003511053 |
|---|
| Protein GI | 291299775 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.888975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC CGCTGCTCGC CTCGCGCGAC GCGGATCCAC CCTCGGCTTC GGTCGCGGCG
CGGGCCCAGG AGTTCGAGTC GTTCGTCCGC GACCGCAGCA CCGCGCTGCT GCGGACGGCG
TACCTGCTCA CCGGTGACCC GCACCTGGCC GAAGACCTGG TGCAGTCCGC CCTGGCCCGG
ACCCACGGCG CCTGGAAGCG ACTGCACGAG ACGGGCAACG CCGAGGCGTA CACCCGCAAG
GTCATGTACC ACCTGCAGGT CAGCTGGTGG CGCAAACGCA GGGTCGCCGA ATCGCTGTCG
GAGGTGGTGC CCGACCAGTT CGTCGCCGAC GACACCAACT CGCTGACGGC GTTGCGCCTG
ACCCTGCACC AGGCGCTGCT GCGGCTGACC GCCAAGCAGC GCGCCGTGAT CGTGCTGCGG
TTCTTCGAGG ACCGGACCGT CTCCGAGACG GCCGACATCC TCAACTGTGC GATCGGGACG
GTCAAGAGCC AGACGGCCAA GGGGCTGGCC CGGCTTCGCA CCATCGCACC CGACCTGAAC
GTTCTGTACA CAGAGGAGGG AGAGCTGCGA TGA
|
|---|
| Protein sequence | MTEPLLASRD ADPPSASVAA RAQEFESFVR DRSTALLRTA YLLTGDPHLA EDLVQSALAR
THGAWKRLHE TGNAEAYTRK VMYHLQVSWW RKRRVAESLS EVVPDQFVAD DTNSLTALRL
TLHQALLRLT AKQRAVIVLR FFEDRTVSET ADILNCAIGT VKSQTAKGLA RLRTIAPDLN
VLYTEEGELR
|
|---|
| |