| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2254 |
|---|
| Symbol | |
|---|
| ID | 8883448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2388767 |
|---|
| End bp | 2390227 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | TAP domain-containing protein |
|---|
| Protein accession | YP_003511036 |
|---|
| Protein GI | 291299758 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.267716 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAACC CGTTCACGAA ACGGATCAGC CTGGCCGCGA CGGCTGTGGT CGTCGCCGCC
GTGGCCGCCG TCTACTTCGT CTCCGGTGCC GAAGGGGCGA GCGTGTCCTC GCTCGACTGG
AAACCCTGCC AGGACAACGA CAAGGCCGAC TGCGCCAGCG TCACGGTCCC CATCGACTGG
TCGAAGCGAC AGTCCGGCAC AGTGGACGTC GCCGTCGCCC GCCGTGAGGC CACCGACCCG
AAGCACCGCA TCGGAACGCT GGTCTACGTA CCGGCCGGAC CGGGCAGCTC CGGCGTCGAG
GCGATCACCG ACGACGAGTT CTTCACAATG CTCATCACCT CACCGATCGC CGAACGGTTC
GACGTGATCG GCCTCGACCC GCGCGGCGTC AAACGCAGCC ACCCGGTGAC CTGCGCCAAG
GACCTCGTCG ACAAGGTCGA CGCCGTCGTG CCGCCGACCC GCGAGGGCTA CGACGCCCGC
CTGAAGGGCA ACGCGGCGCT GATGGACGAC TGCCGCGACC GCACCGGGCC GCTGTTCGAC
CACCTCGACA GCGTCAGTGT CGCCAAGGAC ATCGAGGCGC TGCGCTCCGC ACTCGGCGAG
GAGTCGGTCA ACCTGTACGC ACTGTCCTAC GGCACCCTGC CCGCGCAGAT GTACGCCGAA
CAGTTCCCCG ACCGGTTGCG CGGCACGGTC CTGGACAGCA ACATGGACCA CAGTCTGAAC
ACCAAGGACG TCATGGTGAC CGGCGCCGAG GCCACACAGG ACGCCTTCGA TGACCTGGTG
TCCTGGTGCC GGGACGACGA GGAATGTTCG CTGCATGGCA AGGACGTCCG CGCCATGCTC
GCCGACCTGT ACGCCAAGGC CGAAGCCGGG GACCTCACCG AACCCGGCGA CGCGGACACC
CCGGTCACCG TCGCGAACCT GATCAGCGGC ATCGTCTCAC CGCTCGCGGT GACTGACCGT
GGCAAGGCCG CCGACCGGAT CGCCGCGTTG ACGACCGGCA AGGGCAAGGC CGCACCGACC
GAGCAGGCCG ACGGCGAGGT GATGCCGCTT CCCATCACCA TGCAGTGCGC CGACTTCCCG
CGCGGCATCG CCGACTACGA CGCGTTCCGC GACGCCTGGG ACGCGTCCGA GAAGGCCGCC
CCCGACGTCC ACTTCTCACC GTTGAACTGG TCGGTCCCGC AGAACTGCCT GAACTGGGAC
GCGGGCGCCG ACAACCCGAG GCACCGGCTC GACGTGCGGG GCGCCGAACC CGTGCTGGTG
TTGGGATCGC GCTTCGACAC CCAGACGCCG TACTCCTGGA GCGCCAACGT GGCCTCCCAG
ATCGACGGCG CGGTCCTGGC CACCTATGAG GGCCCCGGAC ACGGTGTCTA CCAGCGCACC
GACTGCACCC GGCGGCTCGT CGAGCGCTAC CTGATCCGGG GCGAGACGCC ACGCGACGGG
GTCAGCTGCC CCGCCGCGTA G
|
|---|
| Protein sequence | MRNPFTKRIS LAATAVVVAA VAAVYFVSGA EGASVSSLDW KPCQDNDKAD CASVTVPIDW
SKRQSGTVDV AVARREATDP KHRIGTLVYV PAGPGSSGVE AITDDEFFTM LITSPIAERF
DVIGLDPRGV KRSHPVTCAK DLVDKVDAVV PPTREGYDAR LKGNAALMDD CRDRTGPLFD
HLDSVSVAKD IEALRSALGE ESVNLYALSY GTLPAQMYAE QFPDRLRGTV LDSNMDHSLN
TKDVMVTGAE ATQDAFDDLV SWCRDDEECS LHGKDVRAML ADLYAKAEAG DLTEPGDADT
PVTVANLISG IVSPLAVTDR GKAADRIAAL TTGKGKAAPT EQADGEVMPL PITMQCADFP
RGIADYDAFR DAWDASEKAA PDVHFSPLNW SVPQNCLNWD AGADNPRHRL DVRGAEPVLV
LGSRFDTQTP YSWSANVASQ IDGAVLATYE GPGHGVYQRT DCTRRLVERY LIRGETPRDG
VSCPAA
|
|---|
| |