Gene Snas_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2163 
Symbol 
ID8883356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2308463 
End bp2309770 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content69% 
IMG OID 
ProductDyp-type peroxidase family 
Protein accessionYP_003510949 
Protein GI291299671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.804223 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAG AAGAGCCGAC GACCTCCCCG GCGCTGCCGC GCCGCAAGGT GTTCACCTCG 
CTGGCGGCCA CCGCCGCCGT GGCCGGTACC GCCGGGGTGT TCGCGGGCCA GGCCCTCGCC
CAACCGGCGG TCGCGGGCCC GGAGCCGACG GTGCCGTTCC ACGGCGAACA CCAACCCGGA
ATCGCGATGC CGCAACAGAA ACACGCCGTG TTCGTCGCGT TCCAGCTGCT GCCCAAGGAC
ATGCGCACCG GCAAGGAACT CACCGAGAAA CAGGTCGCCG CGAAACTGGC GGCCCTGCTG
GAGGACTGGA CCGCCACCGC CGAGGCGCTG ATGCGCGGCG CCGACCCCCA ACCCCTGGCC
AGCCACACCA AGTCGCACTT CGCGACCGAG GCCATCGCCG AGGGCCTCAA CCCGGCCCGG
CTGACCATCA CGCTGGGCAT GGGGCCGTGG GCGTTTCGGA TGGCGGGCCT GGCCGACCGC
GCGCCCCGCC ACCTGACCGA ACTGCCCGAC TTCCCCGGCG ACCAGCTCAA CCCCGGCTGG
AGCGGCGGCG ACCTGCTGTT GCAGATCTGC GGCGACGACC CGCAGGTCAT CAGCGAGGCG
TTCCTGTCGA TGCGGGCCCG GGTCATGGGC ACCTGCCAGC TGAAGTGGAC CCAGCAGGGC
TTCCTCAGCA CTCCGAAGGG CGCCACACCC CGCAACCTCA TGGGACACAA GGACGGCACC
GCCAACCCCG GCTTCGACAG CCCCGAGTTC GCCGAGACCG TATGGTCCAA GAAGGACGAA
CCGGAGTGGT TTTCCGGCGG GAGCTACCTG ATCTTCCGCA AGATCCGGAT GCGGCTTCCC
GAATGGAGCC TGGCCACCGC CGACAAACAG AACCGCTCCA TCGGACGGCA CCGCGACACC
GGAGCCGGAC TCGGCGCCGA GACCGAGACC GCCGAACTCG ACCTGGACGC CAAGGACGGC
AAGGGAAAGC CGGTCATCCC GATCGACGCC CACGTCCGCC GCGTCAAGGA CGTCCCGATG
TTCCGCCGCA GCTTCAACTA CGACTACGGC TTCCTGACCC AGAAGGAACT GCAGCAGGAC
GACCACGCCA CCGGCACCGA CGGCCACAGC CACGACAAGC ACCCCTACGA CGCCGGACTG
CTGTTCACCG CCTACGTCGC CGACCCGGCG AACTTCATCG AGGCGCAGGA CAAGATGTCC
GAATCCGACG CCCTCAACGA GTTCGTCATC AACACCGGCA GCGCCATCTT CGCCGTCCCG
CCGGGAGTCT CCGAAGGCCA AAGCTGGGCG CGGGGACTGT TCGGGTGA
 
Protein sequence
MPEEEPTTSP ALPRRKVFTS LAATAAVAGT AGVFAGQALA QPAVAGPEPT VPFHGEHQPG 
IAMPQQKHAV FVAFQLLPKD MRTGKELTEK QVAAKLAALL EDWTATAEAL MRGADPQPLA
SHTKSHFATE AIAEGLNPAR LTITLGMGPW AFRMAGLADR APRHLTELPD FPGDQLNPGW
SGGDLLLQIC GDDPQVISEA FLSMRARVMG TCQLKWTQQG FLSTPKGATP RNLMGHKDGT
ANPGFDSPEF AETVWSKKDE PEWFSGGSYL IFRKIRMRLP EWSLATADKQ NRSIGRHRDT
GAGLGAETET AELDLDAKDG KGKPVIPIDA HVRRVKDVPM FRRSFNYDYG FLTQKELQQD
DHATGTDGHS HDKHPYDAGL LFTAYVADPA NFIEAQDKMS ESDALNEFVI NTGSAIFAVP
PGVSEGQSWA RGLFG