Gene Snas_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2124 
Symbol 
ID8883317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2248219 
End bp2251794 
Gene Length3576 bp 
Protein Length1191 aa 
Translation table11 
GC content72% 
IMG OID 
Productchromosome segregation protein SMC 
Protein accessionYP_003510911 
Protein GI291299633 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00819579 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGCATCTGA AGAGCCTGAC GCTGAAAGGC TTCAAGTCCT TCGCCTCGGC GACTACGTTG 
CGTTTCGAGC CGGGTATCAC GTGTGTGGTG GGGCCCAACG GTTCCGGCAA ATCGAACGTG
GTCGACGCGA TCGCGTGGGT GCTGGGGGAG CAGGGCGCCA AGGCGCTGCG CGGCGGCAAG
ATGGAGGACG TCATCTTCGC CGGTACCTCC GGGCGGGCCC CGCTGGGACG CGCCGAGGTC
ACCCTGACGA TCGACAACTC CGACGGCGCC ATCCCGATCG ACTACACCGA GGTGTCGATC
ACCCGGCGGA TGTTCCGCTC CGGTGAGGGC GAGTATGAGA TCAACGGCGA CCGCTGCCGA
CTGCTGGACA TCCAGGACCT GTTGTCCGAC TCCGGTATCG GTCGCGAGAT GCACGTCCTG
GTGGGGCAGG GCAAGCTCGA CTCCTACCTG CACGCCCGGC CCGAGGACCG CCGCGCCTTC
ATCGAGGAGG CCGCCGGCGT CCTCAAACAC CGCAAGCGCA AGGAAAAGGC GCTGCGGAAG
CTGGAGGCCA TGGAGGCCAA CCTCAACCGG CTCAACGACC TGACCTCCGA GCTGCGGCGG
CAGCTGAAAC CGCTGGGCCG CCAGGCCGAG CTGGCCCGCC GGGCCGCCGG TATCCAGGCC
GACCTGCGCG ACGCCCGGCA GCGGCTGCTG GCCGACGACC TGGCGCAGCT GCGCACCGGG
CTGGCGCGTG ACCTGGCCGA CGAGAACTCG GTGCGCGCCA AACGCGAACG CGTCGAGGCC
GCCTACAACG AGGTCGCCGA ACAGCTCACC ACCCTGGAGT CGGAGCTGGC CGCCGACGCC
CCGGCGCTGA CCCGGGCCCA GGAGACCTGG TACCGGCTGT CGGCCCTGCA GGAGCGGCTG
CGCTCCACTG GACAGCTTGC CGCCGAACGG GTGCGCTATC TCAGCGAAGA GGCGCAGGAG
GAACGCCCCG GACGCGACCC GGAGCAGCTG GAGGCCGAGG CCGTGCGGGT GCGCGAGCAG
GAGACCGAAC TGCGCGACGC CCTGGTCGCC GACCAGGAAC GGCTCACCGA GGCCGTCGAC
GCCCGGCAGG AGACCGAACA GGCCCTGTCG GAAGCCGAGA AGAACCTGGT GGAGGCCGTC
AAGGCCGTCG CCGCCCGCCG CGAGGGACTG GCCAAACTGA CCGGACAGGT CGGCGCGCTG
CGCAGCCGGT CCCAGGCCGC CGCCGACGAG ATCGCCCGGA TCGCCTCCTC ACTGGCCCAG
GCCCGCGACC GCGCCGAAGC GTGCAAGGAC GCGCTGTCCG AGGCACAGTC GCAGTCGGAC
TTCGTCGACG CCGGGGACGT CGACCTGGAG GAGCGGCTGA CCGCGGCACA GCGCGAGGTC
GAACAGGCCA AGGCCCGCGT GAAGGAACTG GCGACCGCCG AACGCGCCGC CCACACCGAC
GCCACCCAGT GGAAGGCCCG CGAAGAGGCA CTGGCGATGG GCCTGCGCCG CAAGGACGGC
GCGGGCGCGC TGCTGGGCAA GGCCGAGCAG GTGCCCGGAT TCCTGGGCAG CATCTCCGCG
CTGTTGACCG TCGAACCCGG CTACGAGGCC GCCCTGGCGG CGTCGCTGGG CCGACTGGCC
GACGCGGTCG CGGTCTCCGG CGGCGAGGGC GCCGTGTCGG CGCTCCAGCT GCTGAAGGCC
GACGACGCCG GACAGGCCAG CCTGCTGCTG GCCTCCGGCG CTCCCGGCGC CGCCGAGACG
ACCCCGGCCG ACATCACCGG ACTCCCCGAG GGAGTGGTCC CGGCCGCGAA CCTGGTCAAG
GTGCCCGCCG AACTGTCGGC CGCCGTGGCG CGGACGCTGG CGGGCATGGT CATCGTCGAC
ACCCTGGACC TGGCCCGGGA TCTGGTCGCC TCGCGTCCGG AACTGACCGC CGTCACCCGC
GACGGCGACG TGCTGGGCCG CGACTGGGCC GTGGGCGGTT CGGCCTCGGG CCAGAGCTTC
ATCGAGGTGC AGGCCGCCGT CGACGAGGCC CGCGACAAAC GCGCCGAATC CGAAGCCCGC
GCCGAATCCC TTGCCGCGCA ACTGGAAGGC GCCCGCGAGG ACGAGACGTC CCGGCAGACG
GCCCTGGAGG CGATGAAGGC CAAACGCGCC GAGGCCGACA AGGAACGCAA CGCCGTGGCC
CGCAAGCTGG CCGAACTGGG CGCCGCCGCC AACTCCGCCG AGGGCGAGGT GCGGCGGCTG
TCGGAGGCCA AGGAGGAGGC CGAGACCGCC CGCGACACCG ACCTGGCGGG ACTGGCCGAA
CTGGAGGAGC AGCTGCGCAT CGCCGAGTCG GCGCCCGACG AGGAGGACCC CTCCACCGCC
GAACGCGACC GGCTCGCCGT GACCCTGCAA CAGTCCCGGC AGAACGAGAT GGAGACCCGG
CTGGCGGTGC GCACCGCCGA GGAGCGGGTC GCCGCACTGG CGGGCCGCGC CGACGGACTG
GCGCGGCAGG CCGCCGCCGA GCGGCAGGCC CGGGAACGCG CCGCCGTCCG CAAGGCCGCC
CGGCAGCGGG GCGCCGCGAT CGCCGGAGCC GTCGCCCAGG GCGTGGAGGC CGCACTGGCC
CGCATCGCCG AGTCGCTGGA CCGCGCGGCC GCCGAACGCG ACGCCGCCCA GCAGGCCAAG
ACCGCCCGCG AGGCCGCCGT CACCGAGGCC CGCAAACGGG TGCGCGAACA CGGCGCCGAA
CTGGAGCGGC TCACCGACGC CGTCCACCGC GACGAGGTGG CTCGCACCGA GCAGCGGCTG
CGCATCGAAC AGCTGGAGGC CCGCGCGGGC GAGGAGTTCG GCATCGACGT CGACACCCTC
ATCGCCGAGT ACGGCCCCGA GCAGCCGGTG CCGCCCTCGG CCGCCGAACT GGCCAAGGCC
GAAGCCGACG GCAAACCCGA ACCGATGGCG GTCCCGTTCG AGCGGGCCGT CCAGGAGAAG
CGCGCCGCCC GTGGCGAACG GGAACTCAAA CTGCTCGGCA AGGTCAACCC CTTGGCGCTG
GAGGAGTTCG CGGCCCTCGA GGAGCGCTAC AAGTTCCTGT CGGAGCAGCT GGACGACCTG
ACCAAGACCC GCAAGGACCT GCTCAGCGTC GTCAAGGAGG TCGACGACCG GATCCTGGAC
GTGTTCACCG AGGCGTACCA CGACGTGGCC CGCGAGTTCG AGCACGTCTT CGCCACCGTG
TTCCCCGGCG GCGACGGACG GCTGCTGCTG ACCGACCCGG ACAACATGCT CACCACCGGC
ATCGAGGTCG AGGCCCGCCC ACCCGGCAAG AAGGTCAAGC GACTGTCGCT TTTGTCCGGT
GGCGAGCGGT CGCTGACCGC GATCGCGTTG CTGTGCGCGA TCTTCAAGGC CCGGCCCAGT
CCGTTCTACC TGATGGACGA GGTCGAGGCC GCCCTCGACG ACGTCAACCT GGGACGCCTC
TTGACCCTGC TGACCCAGCT GCGGGAGTCC TCGCAGCTGC TGGTCATCAC CCACCAGAAG
CGCACCATGG AGGTCGCCGA CGCCCTGTAC GGCGTCACCA TGCGCTCCGG TGTCACCCAG
GTCATCTCGC AGCGTCTCAG CCAGTCCGAG GACTGA
 
Protein sequence
MHLKSLTLKG FKSFASATTL RFEPGITCVV GPNGSGKSNV VDAIAWVLGE QGAKALRGGK 
MEDVIFAGTS GRAPLGRAEV TLTIDNSDGA IPIDYTEVSI TRRMFRSGEG EYEINGDRCR
LLDIQDLLSD SGIGREMHVL VGQGKLDSYL HARPEDRRAF IEEAAGVLKH RKRKEKALRK
LEAMEANLNR LNDLTSELRR QLKPLGRQAE LARRAAGIQA DLRDARQRLL ADDLAQLRTG
LARDLADENS VRAKRERVEA AYNEVAEQLT TLESELAADA PALTRAQETW YRLSALQERL
RSTGQLAAER VRYLSEEAQE ERPGRDPEQL EAEAVRVREQ ETELRDALVA DQERLTEAVD
ARQETEQALS EAEKNLVEAV KAVAARREGL AKLTGQVGAL RSRSQAAADE IARIASSLAQ
ARDRAEACKD ALSEAQSQSD FVDAGDVDLE ERLTAAQREV EQAKARVKEL ATAERAAHTD
ATQWKAREEA LAMGLRRKDG AGALLGKAEQ VPGFLGSISA LLTVEPGYEA ALAASLGRLA
DAVAVSGGEG AVSALQLLKA DDAGQASLLL ASGAPGAAET TPADITGLPE GVVPAANLVK
VPAELSAAVA RTLAGMVIVD TLDLARDLVA SRPELTAVTR DGDVLGRDWA VGGSASGQSF
IEVQAAVDEA RDKRAESEAR AESLAAQLEG AREDETSRQT ALEAMKAKRA EADKERNAVA
RKLAELGAAA NSAEGEVRRL SEAKEEAETA RDTDLAGLAE LEEQLRIAES APDEEDPSTA
ERDRLAVTLQ QSRQNEMETR LAVRTAEERV AALAGRADGL ARQAAAERQA RERAAVRKAA
RQRGAAIAGA VAQGVEAALA RIAESLDRAA AERDAAQQAK TAREAAVTEA RKRVREHGAE
LERLTDAVHR DEVARTEQRL RIEQLEARAG EEFGIDVDTL IAEYGPEQPV PPSAAELAKA
EADGKPEPMA VPFERAVQEK RAARGERELK LLGKVNPLAL EEFAALEERY KFLSEQLDDL
TKTRKDLLSV VKEVDDRILD VFTEAYHDVA REFEHVFATV FPGGDGRLLL TDPDNMLTTG
IEVEARPPGK KVKRLSLLSG GERSLTAIAL LCAIFKARPS PFYLMDEVEA ALDDVNLGRL
LTLLTQLRES SQLLVITHQK RTMEVADALY GVTMRSGVTQ VISQRLSQSE D