Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2124 |
Symbol | |
ID | 8883317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2248219 |
End bp | 2251794 |
Gene Length | 3576 bp |
Protein Length | 1191 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | chromosome segregation protein SMC |
Protein accession | YP_003510911 |
Protein GI | 291299633 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00819579 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGCATCTGA AGAGCCTGAC GCTGAAAGGC TTCAAGTCCT TCGCCTCGGC GACTACGTTG CGTTTCGAGC CGGGTATCAC GTGTGTGGTG GGGCCCAACG GTTCCGGCAA ATCGAACGTG GTCGACGCGA TCGCGTGGGT GCTGGGGGAG CAGGGCGCCA AGGCGCTGCG CGGCGGCAAG ATGGAGGACG TCATCTTCGC CGGTACCTCC GGGCGGGCCC CGCTGGGACG CGCCGAGGTC ACCCTGACGA TCGACAACTC CGACGGCGCC ATCCCGATCG ACTACACCGA GGTGTCGATC ACCCGGCGGA TGTTCCGCTC CGGTGAGGGC GAGTATGAGA TCAACGGCGA CCGCTGCCGA CTGCTGGACA TCCAGGACCT GTTGTCCGAC TCCGGTATCG GTCGCGAGAT GCACGTCCTG GTGGGGCAGG GCAAGCTCGA CTCCTACCTG CACGCCCGGC CCGAGGACCG CCGCGCCTTC ATCGAGGAGG CCGCCGGCGT CCTCAAACAC CGCAAGCGCA AGGAAAAGGC GCTGCGGAAG CTGGAGGCCA TGGAGGCCAA CCTCAACCGG CTCAACGACC TGACCTCCGA GCTGCGGCGG CAGCTGAAAC CGCTGGGCCG CCAGGCCGAG CTGGCCCGCC GGGCCGCCGG TATCCAGGCC GACCTGCGCG ACGCCCGGCA GCGGCTGCTG GCCGACGACC TGGCGCAGCT GCGCACCGGG CTGGCGCGTG ACCTGGCCGA CGAGAACTCG GTGCGCGCCA AACGCGAACG CGTCGAGGCC GCCTACAACG AGGTCGCCGA ACAGCTCACC ACCCTGGAGT CGGAGCTGGC CGCCGACGCC CCGGCGCTGA CCCGGGCCCA GGAGACCTGG TACCGGCTGT CGGCCCTGCA GGAGCGGCTG CGCTCCACTG GACAGCTTGC CGCCGAACGG GTGCGCTATC TCAGCGAAGA GGCGCAGGAG GAACGCCCCG GACGCGACCC GGAGCAGCTG GAGGCCGAGG CCGTGCGGGT GCGCGAGCAG GAGACCGAAC TGCGCGACGC CCTGGTCGCC GACCAGGAAC GGCTCACCGA GGCCGTCGAC GCCCGGCAGG AGACCGAACA GGCCCTGTCG GAAGCCGAGA AGAACCTGGT GGAGGCCGTC AAGGCCGTCG CCGCCCGCCG CGAGGGACTG GCCAAACTGA CCGGACAGGT CGGCGCGCTG CGCAGCCGGT CCCAGGCCGC CGCCGACGAG ATCGCCCGGA TCGCCTCCTC ACTGGCCCAG GCCCGCGACC GCGCCGAAGC GTGCAAGGAC GCGCTGTCCG AGGCACAGTC GCAGTCGGAC TTCGTCGACG CCGGGGACGT CGACCTGGAG GAGCGGCTGA CCGCGGCACA GCGCGAGGTC GAACAGGCCA AGGCCCGCGT GAAGGAACTG GCGACCGCCG AACGCGCCGC CCACACCGAC GCCACCCAGT GGAAGGCCCG CGAAGAGGCA CTGGCGATGG GCCTGCGCCG CAAGGACGGC GCGGGCGCGC TGCTGGGCAA GGCCGAGCAG GTGCCCGGAT TCCTGGGCAG CATCTCCGCG CTGTTGACCG TCGAACCCGG CTACGAGGCC GCCCTGGCGG CGTCGCTGGG CCGACTGGCC GACGCGGTCG CGGTCTCCGG CGGCGAGGGC GCCGTGTCGG CGCTCCAGCT GCTGAAGGCC GACGACGCCG GACAGGCCAG CCTGCTGCTG GCCTCCGGCG CTCCCGGCGC CGCCGAGACG ACCCCGGCCG ACATCACCGG ACTCCCCGAG GGAGTGGTCC CGGCCGCGAA CCTGGTCAAG GTGCCCGCCG AACTGTCGGC CGCCGTGGCG CGGACGCTGG CGGGCATGGT CATCGTCGAC ACCCTGGACC TGGCCCGGGA TCTGGTCGCC TCGCGTCCGG AACTGACCGC CGTCACCCGC GACGGCGACG TGCTGGGCCG CGACTGGGCC GTGGGCGGTT CGGCCTCGGG CCAGAGCTTC ATCGAGGTGC AGGCCGCCGT CGACGAGGCC CGCGACAAAC GCGCCGAATC CGAAGCCCGC GCCGAATCCC TTGCCGCGCA ACTGGAAGGC GCCCGCGAGG ACGAGACGTC CCGGCAGACG GCCCTGGAGG CGATGAAGGC CAAACGCGCC GAGGCCGACA AGGAACGCAA CGCCGTGGCC CGCAAGCTGG CCGAACTGGG CGCCGCCGCC AACTCCGCCG AGGGCGAGGT GCGGCGGCTG TCGGAGGCCA AGGAGGAGGC CGAGACCGCC CGCGACACCG ACCTGGCGGG ACTGGCCGAA CTGGAGGAGC AGCTGCGCAT CGCCGAGTCG GCGCCCGACG AGGAGGACCC CTCCACCGCC GAACGCGACC GGCTCGCCGT GACCCTGCAA CAGTCCCGGC AGAACGAGAT GGAGACCCGG CTGGCGGTGC GCACCGCCGA GGAGCGGGTC GCCGCACTGG CGGGCCGCGC CGACGGACTG GCGCGGCAGG CCGCCGCCGA GCGGCAGGCC CGGGAACGCG CCGCCGTCCG CAAGGCCGCC CGGCAGCGGG GCGCCGCGAT CGCCGGAGCC GTCGCCCAGG GCGTGGAGGC CGCACTGGCC CGCATCGCCG AGTCGCTGGA CCGCGCGGCC GCCGAACGCG ACGCCGCCCA GCAGGCCAAG ACCGCCCGCG AGGCCGCCGT CACCGAGGCC CGCAAACGGG TGCGCGAACA CGGCGCCGAA CTGGAGCGGC TCACCGACGC CGTCCACCGC GACGAGGTGG CTCGCACCGA GCAGCGGCTG CGCATCGAAC AGCTGGAGGC CCGCGCGGGC GAGGAGTTCG GCATCGACGT CGACACCCTC ATCGCCGAGT ACGGCCCCGA GCAGCCGGTG CCGCCCTCGG CCGCCGAACT GGCCAAGGCC GAAGCCGACG GCAAACCCGA ACCGATGGCG GTCCCGTTCG AGCGGGCCGT CCAGGAGAAG CGCGCCGCCC GTGGCGAACG GGAACTCAAA CTGCTCGGCA AGGTCAACCC CTTGGCGCTG GAGGAGTTCG CGGCCCTCGA GGAGCGCTAC AAGTTCCTGT CGGAGCAGCT GGACGACCTG ACCAAGACCC GCAAGGACCT GCTCAGCGTC GTCAAGGAGG TCGACGACCG GATCCTGGAC GTGTTCACCG AGGCGTACCA CGACGTGGCC CGCGAGTTCG AGCACGTCTT CGCCACCGTG TTCCCCGGCG GCGACGGACG GCTGCTGCTG ACCGACCCGG ACAACATGCT CACCACCGGC ATCGAGGTCG AGGCCCGCCC ACCCGGCAAG AAGGTCAAGC GACTGTCGCT TTTGTCCGGT GGCGAGCGGT CGCTGACCGC GATCGCGTTG CTGTGCGCGA TCTTCAAGGC CCGGCCCAGT CCGTTCTACC TGATGGACGA GGTCGAGGCC GCCCTCGACG ACGTCAACCT GGGACGCCTC TTGACCCTGC TGACCCAGCT GCGGGAGTCC TCGCAGCTGC TGGTCATCAC CCACCAGAAG CGCACCATGG AGGTCGCCGA CGCCCTGTAC GGCGTCACCA TGCGCTCCGG TGTCACCCAG GTCATCTCGC AGCGTCTCAG CCAGTCCGAG GACTGA
|
Protein sequence | MHLKSLTLKG FKSFASATTL RFEPGITCVV GPNGSGKSNV VDAIAWVLGE QGAKALRGGK MEDVIFAGTS GRAPLGRAEV TLTIDNSDGA IPIDYTEVSI TRRMFRSGEG EYEINGDRCR LLDIQDLLSD SGIGREMHVL VGQGKLDSYL HARPEDRRAF IEEAAGVLKH RKRKEKALRK LEAMEANLNR LNDLTSELRR QLKPLGRQAE LARRAAGIQA DLRDARQRLL ADDLAQLRTG LARDLADENS VRAKRERVEA AYNEVAEQLT TLESELAADA PALTRAQETW YRLSALQERL RSTGQLAAER VRYLSEEAQE ERPGRDPEQL EAEAVRVREQ ETELRDALVA DQERLTEAVD ARQETEQALS EAEKNLVEAV KAVAARREGL AKLTGQVGAL RSRSQAAADE IARIASSLAQ ARDRAEACKD ALSEAQSQSD FVDAGDVDLE ERLTAAQREV EQAKARVKEL ATAERAAHTD ATQWKAREEA LAMGLRRKDG AGALLGKAEQ VPGFLGSISA LLTVEPGYEA ALAASLGRLA DAVAVSGGEG AVSALQLLKA DDAGQASLLL ASGAPGAAET TPADITGLPE GVVPAANLVK VPAELSAAVA RTLAGMVIVD TLDLARDLVA SRPELTAVTR DGDVLGRDWA VGGSASGQSF IEVQAAVDEA RDKRAESEAR AESLAAQLEG AREDETSRQT ALEAMKAKRA EADKERNAVA RKLAELGAAA NSAEGEVRRL SEAKEEAETA RDTDLAGLAE LEEQLRIAES APDEEDPSTA ERDRLAVTLQ QSRQNEMETR LAVRTAEERV AALAGRADGL ARQAAAERQA RERAAVRKAA RQRGAAIAGA VAQGVEAALA RIAESLDRAA AERDAAQQAK TAREAAVTEA RKRVREHGAE LERLTDAVHR DEVARTEQRL RIEQLEARAG EEFGIDVDTL IAEYGPEQPV PPSAAELAKA EADGKPEPMA VPFERAVQEK RAARGERELK LLGKVNPLAL EEFAALEERY KFLSEQLDDL TKTRKDLLSV VKEVDDRILD VFTEAYHDVA REFEHVFATV FPGGDGRLLL TDPDNMLTTG IEVEARPPGK KVKRLSLLSG GERSLTAIAL LCAIFKARPS PFYLMDEVEA ALDDVNLGRL LTLLTQLRES SQLLVITHQK RTMEVADALY GVTMRSGVTQ VISQRLSQSE D
|
| |