Gene Snas_2113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2113 
Symbol 
ID8883306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2237785 
End bp2238786 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510900 
Protein GI291299622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.178089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0487152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTACC CACCGCAGCA ACCCCAGGAC TGGGGAGGCC AGCAACCCTA CGATCCCAAC 
CAGCAGGGGT ACGGCCAGCA GCCGCAGCCG GGGTTCGACC AGCAACTTCC CAGCTATGAC
CTCGAACCGC AGCCGGGTCA GTACCAGCAG GACCCGTACG CGCAGCCCCA GGTCGACCCG
TACCAGCCGC CGCAGCCGTC CTACGACCCC GCGCAGTACT CGGCGCCGCC GGTCAGCGTC
GCGCCCGCCA GCGGCCAGCC GTACGGCGGT GGCCCCATGC TGCCACCGGC CGCGCCCAAG
AGCAGCGCTC CGGTGTGGAT CTTCATCGTC GGCGGTGTGG TGTTGCTCGC ACTGATCGGC
GTGGGTGTGT TCTTCGCCAT CAAGTCCACC GGCGGCAGTC CCGACGACGA CAAGACGGAC
TCGGCCAACG AGAAGTCCGA GGAGCCCTCC GACGACCCGC CCTCGGCATC ACAGTCGCCC
AGCGGCGACA TGATCGTCGA CACCAACACC GGTCTGGGCT TCAAGAGCAT GTCGGGCTGG
CAGACCATGG ACACCTCGGC GGGGATCCCG GTTCCGGGCT TCACGTCCTT CCAGGGGCAG
CAGTACGAGG TGACCACCGA CTGGGTGGCG ATGCTGGGTG TCGGCGAGAT CGACGCGTCC
ACCTTGGGCT ACAAGGACTC CGGTGATCTG AAGGACACCG TCAAGGCCAT CGCCAAGGAG
TACGACAAGA ACAACTTCGG CAAGGACCCC AAGGGTCTGG ACCGCGACGT GAAGGCCGAG
TACGACGACG CCGACCTCGC CGGGAAGAAG GCCATCACGA TGGCCTACCA CCTGACCTGG
GACAAGGGTG AGAACCCCGA CACCGGAGAA CAGATCGTCA TCGCCGTGAT CGACGTCGGC
GGCGGCAAGG CGGCCGGATT CCTGGGCAGC CTGCCCGACT CCACGCCGAA AGACCAGGTG
GACGCGGCCG TGGAGGCCGC CGGAACCCTG GCCTTCAGCT AG
 
Protein sequence
MTYPPQQPQD WGGQQPYDPN QQGYGQQPQP GFDQQLPSYD LEPQPGQYQQ DPYAQPQVDP 
YQPPQPSYDP AQYSAPPVSV APASGQPYGG GPMLPPAAPK SSAPVWIFIV GGVVLLALIG
VGVFFAIKST GGSPDDDKTD SANEKSEEPS DDPPSASQSP SGDMIVDTNT GLGFKSMSGW
QTMDTSAGIP VPGFTSFQGQ QYEVTTDWVA MLGVGEIDAS TLGYKDSGDL KDTVKAIAKE
YDKNNFGKDP KGLDRDVKAE YDDADLAGKK AITMAYHLTW DKGENPDTGE QIVIAVIDVG
GGKAAGFLGS LPDSTPKDQV DAAVEAAGTL AFS