| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2048 |
|---|
| Symbol | |
|---|
| ID | 8883241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2171118 |
|---|
| End bp | 2171861 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003510836 |
|---|
| Protein GI | 291299558 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.833471 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATGA ACATCGTAGA AGTCGACAAG GCCGTCGTCG GCTACGCCGA TCGGCGGGTA
CTGCACGGCG TCGACGTGAC GGTCCAACCC GGCCAAGCCG TGGCGCTGTT GGGCGCCAAC
GGATCCGGCA AATCAACCCT GGTGCGCACC GCACTGGGGT TGGTGCCGTT GTCGGCCGGG
AAGGTCACGC TGTTCGGCAC CCCGCTCAAG GCCTTCAAGC AGTGGCGCCG CATCGGCTAC
GTGCCGCAGC GGCTGGGCGC CGGGGGCGGC GTCCCGGCCA CCGTCGGCGA GGTCGTGGCC
GCCGGACGCC TGGCCCGGCG CCGGATCCCG TGGCCTGCCA ACGCCACCGA CCGTCGCGTG
GTCGCCGAGG CCATCGAGGC CGTCGGCCTT TCCGACCGGG TCAAGGACTC GGTGTCCACA
CTGTCGGGAG GCCAGCAGCA GCGGGTCCTC ATCGCCCGCG CCCTGGCCAC CGAACCCGAA
CTGCTGGTCA TGGACGAACC CACCTCCGGC GTCGACGCCG CCAACACCGA ACTGCTGGCC
GAGTTGCTGG GGCAGCGCCT CGACGCCGGT GCCGCGATCC TGTTGGTGGC ACACGAACTG
GGCCCGCTGG CCCCGTTGAT CGACCGCGCC GTGGTGCTGG GCGGCGGCCG GGTCGTCCAC
GACGGACCCG TGCCCGCCAA CGGCGACACC GCCGGGGAAC ACTGCGAGAC CCCGGTGCAC
CAGAACCTGT GGAGCGTGGC CTGA
|
|---|
| Protein sequence | MSMNIVEVDK AVVGYADRRV LHGVDVTVQP GQAVALLGAN GSGKSTLVRT ALGLVPLSAG
KVTLFGTPLK AFKQWRRIGY VPQRLGAGGG VPATVGEVVA AGRLARRRIP WPANATDRRV
VAEAIEAVGL SDRVKDSVST LSGGQQQRVL IARALATEPE LLVMDEPTSG VDAANTELLA
ELLGQRLDAG AAILLVAHEL GPLAPLIDRA VVLGGGRVVH DGPVPANGDT AGEHCETPVH
QNLWSVA
|
|---|
| |