| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_2047 |
|---|
| Symbol | |
|---|
| ID | 8883240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 2170192 |
|---|
| End bp | 2171127 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | periplasmic solute binding protein |
|---|
| Protein accession | YP_003510835 |
|---|
| Protein GI | 291299557 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.862803 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAGC CCCTCCCGCG TCTAGCCGTC CTCAGCGTGG CCACCGCCCT GACCACCGCC
ACGCTGTCGG CGTGCGGATC CGCAGGTGCC CAGGGCTCCG GCGTCAACGT GGTCGCGTCC
TTCTACCCGT TGCAGTTCGT CTCCGAGCAG GTCGGCGGCG AGCACGTCAC CGTCACCAAC
CTGACCGCCG CCGGTGCCGA ACCTCACGAT CTCGAACTCA AACCCCGGCA GGTGGCCGAC
ATCACCGACG CCCAGCTGGT CGTCTTCCTG AAGGGCTTCC AGCCCGCCGT CGACGACGCG
GTCAAGGAGC AGGCCCCCGA CACCTCGCTC GACGTGGCCA AGACGACCGA ACTGACCAAG
CCCGAGGAAG GCCACGAGGA GCACGCCGAG GAAGGCGACC ACGAGCACGA CCACGGCGAC
CTCGACCCGC ACGTGTGGCT CGACCCCACC AAACTCGCCG AGATCGCCGA CGGCGTCGCC
GACCGGCTGG CCAAGGCCGA CCCCGACCAC GCCGAGGACT TCAAGGCGAA CGCGAAGTCG
CTGGGCGAGA AGCTCACCGA CCTGGACTCC GAATACGACG ACGGCCTGGC GAAGTGCGAC
AGCCGCGACC TCGTCACCTC GCACGCCGCC TTCGGTTACC TCGCCGCCCG CTACGACCTG
CACCAGGTGG CGATGTCCGG CCTGACCCCG GAATCCGAGC CGGGTTCGGG GGCCATGAAG
CAGATCATGG ACTACGTCGA GGAACACGGC GTCACCACGA TCTACTACGA GACCCTGGTC
AGCCCCGACG TCGCCGAGAC CATCGCCGAC AAGACCGGCG CCAAGACCGC CGTGCTCGAC
CCCATCGAGG GTCTTCAGAA GGGCAGCGAG GACGACTACT TCTCCATCAT GGAGTCGAAC
CTGTCCGCGC TGCGAGAGGG ACTGGGATGT CAATGA
|
|---|
| Protein sequence | MRKPLPRLAV LSVATALTTA TLSACGSAGA QGSGVNVVAS FYPLQFVSEQ VGGEHVTVTN
LTAAGAEPHD LELKPRQVAD ITDAQLVVFL KGFQPAVDDA VKEQAPDTSL DVAKTTELTK
PEEGHEEHAE EGDHEHDHGD LDPHVWLDPT KLAEIADGVA DRLAKADPDH AEDFKANAKS
LGEKLTDLDS EYDDGLAKCD SRDLVTSHAA FGYLAARYDL HQVAMSGLTP ESEPGSGAMK
QIMDYVEEHG VTTIYYETLV SPDVAETIAD KTGAKTAVLD PIEGLQKGSE DDYFSIMESN
LSALREGLGC Q
|
|---|
| |