Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2035 |
Symbol | |
ID | 8883228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 2157833 |
End bp | 2158987 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | CapA family protein |
Protein accession | YP_003510823 |
Protein GI | 291299545 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0211653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGGCG CGCATTCCCA CCGCGATCGT GTCCCCGTGT GGCGCAGGCC CGTGGTCGTC GCCGGGACGG CACTGGTGGT GCTGGCCGCC GTGACGCTCA CCGTCGTGTG GGCGGTGTCG GAGGACAAAC CGGCTTCGGC CGCAGAGGAC CCCGGCTCCG AGGACACCGA ATCCAGCGCC GCGTCCTCTC CCGAGCCCGA CCCGGACGCG ATCACCGTCA CCGCGGTCGG CGACACCATC ATGGGCAACC TGCCCGACGG GCTTCCCGAC GACGGCGCCG GGTACTTCGA CAAGGTCGCC GAACATCTCA AGGGCGACAT CGTCTTTGGC AACCTCGACG GTGCACTGTC CGAACACGAC GACTACAAGA AGTGCAAGTC CAAGAAGAAG TGCTTCTACA TCCGGATGCC GCCCGAGTAC GCGTCGCTGC TGAAGGACGC GGGATTCACC GTGATGAACG GCTCGAACAA CCACGCCTTC GACTCCGGGC CGGAAGGTTA CGCCGACACC CAGGCCGCCC TGGACGGCGC CGGGATCGAC TATCTGGGCG TCAAGGGCGA GATCGTCGAG ACCGAGGTGC GCGGCGTCAA GACCGCGATG GTCGGATTCT CCACCTACGA CCGCTATGAC AGCCTGCTCG ACCTGAACCT GGTGTCGCAG CTGGTGTCGG CCGCCGCCGA GCGCGCCGAC GTGGTCGTGG TGAGCATGCA CCTGGGTGCC GAGGGCGTCG ACGCCCGCCA CACCCCCGAG GGCCCGGAGA CCTTCTACGG CGAGGACCGT GGCGACTCGC GCGCGGCCAC CCACGCCGCC GTCGACGCCG GGGCCGACCT GGTGCTGGGG CACGGGCCGC ACGTGCTGCG CGGCATGGAG TTCTACAAGG ACCGGCTCAT CGCCCACAGT CTCGGGAACT TCGCGGGCTA CGGCGTTCTC AAGACCTCCG GCGCGCTGGG CCGGGGCGCC ATCCTCACGG TGACTGTGGA CAAGCAGGGC GAGTGGGTGT CCGGGAAGGT GATCCCGTCG ATCATGGTCG ACGGCGGATA CCCGGCCGTC GACGAGGACA ACGGCGCCCA CGCCGACATC ACCGAACTGT CGAAGGACGA CTTCCCGGAC TCAGGCGTCA CTCTGGACGA AAAGGGGAAG ATCTCCAAGC CGTGA
|
Protein sequence | MTGAHSHRDR VPVWRRPVVV AGTALVVLAA VTLTVVWAVS EDKPASAAED PGSEDTESSA ASSPEPDPDA ITVTAVGDTI MGNLPDGLPD DGAGYFDKVA EHLKGDIVFG NLDGALSEHD DYKKCKSKKK CFYIRMPPEY ASLLKDAGFT VMNGSNNHAF DSGPEGYADT QAALDGAGID YLGVKGEIVE TEVRGVKTAM VGFSTYDRYD SLLDLNLVSQ LVSAAAERAD VVVVSMHLGA EGVDARHTPE GPETFYGEDR GDSRAATHAA VDAGADLVLG HGPHVLRGME FYKDRLIAHS LGNFAGYGVL KTSGALGRGA ILTVTVDKQG EWVSGKVIPS IMVDGGYPAV DEDNGAHADI TELSKDDFPD SGVTLDEKGK ISKP
|
| |