Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_1996 |
Symbol | |
ID | 8883188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2116906 |
End bp | 2118174 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | hydroxymethylbutenyl pyrophosphate reductase |
Protein accession | YP_003510785 |
Protein GI | 291299507 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.115086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.19928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACAC ACCCCCCGTT CGAGCTGCTG ATCACCGACC ATCCCGCCAC GACCGTCGCC GGTCCCCTCC CCCAGATCGG GGAGATCGTC GTGGGAACCG GCATCGTCGA TCCCGGCCGG ACCGTGCTGC GAGCCGCCCC GGTGTTGCGG GGAACCCTGA CCCGGCAGGG GATTCCGGCC CGCGGGTCCG ACCTCGGCTC ATACGGCGGT GGCGAGACCG AGGTATCGAT GCTGACCGTG ACCGTCGAGG GTCAGCCGAT CGCGTCGCTC GTGGTGCGGT ACGGCGACCG GGCCGCTACC CAGGCCGCGA CCGGGGTACT GGAGCGGGTG CGGCGGGCCT GGCGGCCCCG CACGGTGCTG CTGGCGTCGC CGCGGTCGTA CTGCGCCGGG GTGGAACGCG CCATCGAGGT CGTCGAGCGG GCGCTGGAAC GGCACGGCCA GCCGGTCTAC GTGCGCAAGC AGATCGTTCA CAACGCGCAT GTCGTGGCGG AGTTGGAGAA GCGCGGCGCG GTCTTCGTCG ACGAACTGGA CCAGGTGCCC GACGGCGCGA CGGTGATCTT CTCGGCCCAC GGGGTGTCAC CGGCGGTGCG CGACGACGCC GACAGCCGGG GGCTGGCCGC CATCGACGCG ACGTGTCCAC TGGTGACGAA GGTGCACGCC GAGGCCCGCC GGTTCGCCGA TCGCGGTGAC ACCGTCGTCC TCATCGGCCA CGATGGACAC GAAGAGGTCG AGGGGACCAT GGGCGAGGCC CCGGAATCGA TGGTGTTGGT CGAATCGGTG GCGGACGTGG AGCGGCTGCG GGTGCCCGAC CCGCGGCGGT TGGCGTACCT GACGCAGACG ACGCTGGCGG TGGAGGAGAC CGAGGAGATC ATCGCCGCGC TGCGCGCCCG GTTCCCGGCC CTGCGGGGTC CGGGTTCGGA CGACATCTGT TACGCCACCA CGAACCGGCA GCACGCCGTT GCGGCCATCG TGGACGACTG CGATCTGGTG CTGGTGGTCG GTTCGGCCAA CTCCTCCAAC TCACGGCGGC TCGTGGAGCT GGCCGAGCGG CACGGCCGGA TGGCGCGGCT CATCGACTCC GCCGAGGACA TCGAGCTGGA CTGGCTGACC GGAGCCGACA CCGTCGGGCT CAGCGCCGGG GCCTCGGCGC CGCAGATCCT CATGGACGAG GTGGTCGAGA CACTGGCGGG TTTCGGGCCC ATCGACGTCG TCGAGCGGGT GGTCACCGCC GAGGACCAGT CCTTCGTGCT GCCCCGGGAG GTACGTTGA
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Protein sequence | MSTHPPFELL ITDHPATTVA GPLPQIGEIV VGTGIVDPGR TVLRAAPVLR GTLTRQGIPA RGSDLGSYGG GETEVSMLTV TVEGQPIASL VVRYGDRAAT QAATGVLERV RRAWRPRTVL LASPRSYCAG VERAIEVVER ALERHGQPVY VRKQIVHNAH VVAELEKRGA VFVDELDQVP DGATVIFSAH GVSPAVRDDA DSRGLAAIDA TCPLVTKVHA EARRFADRGD TVVLIGHDGH EEVEGTMGEA PESMVLVESV ADVERLRVPD PRRLAYLTQT TLAVEETEEI IAALRARFPA LRGPGSDDIC YATTNRQHAV AAIVDDCDLV LVVGSANSSN SRRLVELAER HGRMARLIDS AEDIELDWLT GADTVGLSAG ASAPQILMDE VVETLAGFGP IDVVERVVTA EDQSFVLPRE VR
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