Gene Snas_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1948 
Symbol 
ID8883140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2070536 
End bp2072110 
Gene Length1575 bp 
Protein Length524 aa 
Translation table11 
GC content68% 
IMG OID 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003510737 
Protein GI291299459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.621717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA CCGGCGAGAC CCTACCCCCA CCGAAGGCCA CCAGCCGGGA GTGGATCGGC 
CTGGCCGTCC TGGCACTGCC GACCCTGTTG CTGTCATTGG ACCTGAGCGT GCTGTACCTC
GCCCTGCCGC AACTGAGCGC CGACCTGCGT CCGTCCAGTA CCCAGACACT GTGGATCTTG
GACAGTTACG GCTTCATGAT CGCCGGTTTC CTCGTCACCA TGGGGACACT GGGCGATCGC
ATCGGCCGAC GCAAGCTGCT GCTGATCGGC GCCGCCGCCT TCGGTGTCGC CTCACTGGCG
GCCGCCTACG CGACCTCGCC GGAGATGCTG ATCGCCGCCC GGGTGCTGTT GGGAGTGGCC
GGGGCGACCC AGATGCCGTC GCTGCTGGCG TTGATCGGCA ACATGTTCAA GGACGCGAAA
CAGCGTTCCT TCGCCATCGC GACCTGGATG AGCTGCTTCA TGGGCGGCAT GGCCGTCGGC
CCCGTCATCG GCGGCTTCCT GCTGGAGAAC TTCTGGTGGG GCTCGGTGTT CCTCATCGGA
GTGCCGGTCA TGGTGGTGCT GCTGGTGGCC GGTCCGTTCC TGCTGCCGGA GTACAAGGAC
GGCTCGGCCG GACGCGTCGA CCTGATCAGT GTCGCGCTGT CGCTGCTGGC GATCCTGCCG
TTCATCTACG GGCTCAAGGA GATCGCCAAG ACCGGCGTGC AGGTGTCGCA TGTGGCCGCG
ATCGCCGTCG GGCTGGCGTT CGGCGCGGTG TTCGTCCGTC GGCAGCGCCG CCTGAAGGAC
CCGCTGCTCG ACCTGCGGCT GTTCGGCAAC CGGACCTTCA CCGCGGCCCT GACCTCGATG
AGCCTGGGCG CCGGCATCAT GGGCGGCGTC ATGTTCCTGT TCAACCAGTA CCTCCAGATG
GTCGCCGGAC TGTCCCCACT GGAGGCAGGA CTGTGGATGG TGCCGCCGTC GGTCTTCATG
ATCACCATCA CCCAGATCAC CCCGGCCATC GCCCGCGCCA TGCGCCGCGA CCACCTGATC
GCCACCGGTT TCGCGCTGGC GGCGGTGGGC ATCTTCATCC TGGCCCAGGT CGAGGCGGAC
TCCGGTCCGC TGATGCTGGT CGCCGGTATG ACCGTCACCG CGATGGGCAT GGCGCCGCTG
GGCATGGTCT GCACCGACAT CGTGATCGGC TCGGTCCCGC CGGAGAAGGC CGGTTCGGCG
TCGTCCATGT CGGAGACCAG CGCCGAGTTC GGCATCGCCA TGGGCGTGGC GGTCTTCGGC
AGCCTCGCCA CCGCCGTCTA CCGGGGCGGT ATCGACATCC CCGAGGGCAC CCCGGACGCC
GCTGCTGCCG CCGCCCGCGA GAGCCTGCCC GGCGCCGCAG AGGCCGCCAA GGATCTGCCC
GGCCAGCTGG GCGCCGGACT GCTGGACACT GCCCGCGAGG CGTTCACGTC CGGTCTGGGC
GTGGTGGCCA CGGTGGGCGC GATCGTGATG GTCGGCCTGG CGGCGTTGGG CCTGGTCATG
TTCCGGGAAC GCAAGACCAC GCCGGAACCG ACCGCCGAAC AGCAGGACCG GGAAACCGAA
CTCGTCAACG CGTAA
 
Protein sequence
MNTTGETLPP PKATSREWIG LAVLALPTLL LSLDLSVLYL ALPQLSADLR PSSTQTLWIL 
DSYGFMIAGF LVTMGTLGDR IGRRKLLLIG AAAFGVASLA AAYATSPEML IAARVLLGVA
GATQMPSLLA LIGNMFKDAK QRSFAIATWM SCFMGGMAVG PVIGGFLLEN FWWGSVFLIG
VPVMVVLLVA GPFLLPEYKD GSAGRVDLIS VALSLLAILP FIYGLKEIAK TGVQVSHVAA
IAVGLAFGAV FVRRQRRLKD PLLDLRLFGN RTFTAALTSM SLGAGIMGGV MFLFNQYLQM
VAGLSPLEAG LWMVPPSVFM ITITQITPAI ARAMRRDHLI ATGFALAAVG IFILAQVEAD
SGPLMLVAGM TVTAMGMAPL GMVCTDIVIG SVPPEKAGSA SSMSETSAEF GIAMGVAVFG
SLATAVYRGG IDIPEGTPDA AAAAARESLP GAAEAAKDLP GQLGAGLLDT AREAFTSGLG
VVATVGAIVM VGLAALGLVM FRERKTTPEP TAEQQDRETE LVNA