Gene Snas_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1944 
Symbol 
ID8883136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2066748 
End bp2067830 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510733 
Protein GI291299455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.99861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.710657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCACGA TCCGCAAACG TCACGTCCTG TTGAGCGCCG TCGCGGCCGG TGCCGTCTCG 
GCGCTGACCG CCTCGACGGC GTTCGCCGCC GTCGAGTGGA CCGTGACCGA GTCGCCGGAC
ATCGGCACCG GGTACTCCTT CGACGCCATG GACGTCCTGA CCGATGAGGA CGCCTGGGCG
GTCGGCACCG CCGCGACCAA CAGCGGCACC GGAACCGTCG CCGCCCACTG GGACGGTTCG
GCATGGACGC ACACCAAGAC GCCCGAGGGC TGGGACCTGC TGGACGTCTC GGCCGCCGCC
AACGCGGACG TGTGGGCGGT CGGCCGGGGC GCGGACGGCA GCGTCGCGGC GCACTGGGAC
GGCAGGGCCT GGCAGGACAT GGAGAGCCCG AAACCGGAGC TGCCCGACGG ACAGGTCCCC
GGGCTGTACA CCGTCGACAT GATCGCCTCC GGCGAGGCCT GGGCGGGCGG CTGCGGCGAC
GGTGACAGCG GATCCACCGC GTTCGCGCAG CAGTGGGACG GTGACAAGTG GACGGTCATG
GAACTGCCGG TCCCCGACGG CGCTGACAAC TCGTGCGTGT TCTCCATCGA CTTCGTCGCC
GAGGACAACG TCAGGGTCTA CGGCACCACC TGGGACAAGA AGGCGTGGAT CCTGCACTGG
AACGGTCACG AGTGGACGAC CGAGAAGACC CCGGACGACA CCGAGTCGGT GACGCTCACC
GACTCGTACC TCAACCGGAC CGGCGAGCTG TGCGCCTCGG GCTACACCCT GAACGAGAAC
CTGAAGCCCA GCCCGTACCT GCTGTGCCGC GACGGCGAGA CCTGGACCGA GGTCAAGACC
CCGGACATGG ACGCGTTCAT CGGCGCCATC GGTTCCGACG GCGACGGCGG CGTGTACCTG
GCCGGGCGGT CCTTCGACGA CAAGCCGGTA CTGCTGCACT ACGACGGCGA CGCCGTGACC
GAGGAGACCG CGCCGACCAG CGAGGGCGGC GGATTGACGG CGGTGGCGTC CGCGCCCGGC
TCGACCCGGA CGTGGGTCGC CGGAACCGCC GGGGACAAGG GCTTGGCGGC CTACACCGGC
TGA
 
Protein sequence
MFTIRKRHVL LSAVAAGAVS ALTASTAFAA VEWTVTESPD IGTGYSFDAM DVLTDEDAWA 
VGTAATNSGT GTVAAHWDGS AWTHTKTPEG WDLLDVSAAA NADVWAVGRG ADGSVAAHWD
GRAWQDMESP KPELPDGQVP GLYTVDMIAS GEAWAGGCGD GDSGSTAFAQ QWDGDKWTVM
ELPVPDGADN SCVFSIDFVA EDNVRVYGTT WDKKAWILHW NGHEWTTEKT PDDTESVTLT
DSYLNRTGEL CASGYTLNEN LKPSPYLLCR DGETWTEVKT PDMDAFIGAI GSDGDGGVYL
AGRSFDDKPV LLHYDGDAVT EETAPTSEGG GLTAVASAPG STRTWVAGTA GDKGLAAYTG