Gene Snas_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1901 
Symbol 
ID8883093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2017253 
End bp2018266 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003510690 
Protein GI291299412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.762737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0811231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGCTC GCCGCCGCGA GGGAGCCGAA GACGGCTCCG TTTCGGGACG CGGCGAACGG 
CAACGGTCGC TTAGCCTGGC CGCCATGGAA ACAGGTATCG AAGTATCTGA AGTGCATAAA
CGCTATGGGG CGGTGACGGC CCTGGACGGC ATGACCTTCA CCGTCAAGCC GGGGCGGGTC
ACCGGTTTCG TCGGCCCCAA CGGGGCGGGC AAGTCCACCA CCATGCGGGT CATCCTCGGC
CTCGACACGC CGCAACGCGG CCGGGCGCTG GTCAACGGCG AACCGTACCG GCGGCTGCGG
CACCCGCTCA GCCAGGTCGG CGCGCTGCTG GACGCCTCGG CGCTGCAACC CGGGCGTTCG
GCCCGCAACC ATCTGCTGTG GCTGGCCCAT TCCCAGGGCC ACGGCGCCAA ACGCGTCGAC
GCGATGCTGG AGCAGGTGGG GCTGTCGCAG GTGGGGCGGC GCCGGGCGGG CGGCTTCTCG
CTGGGGATGC GGCAGCGGCT GGGCATCGCC GCCGCGCTGC TGTGCGATCC GCCGGTGCTG
ATGCTGGACG AGCCGTTCAA CGGGCTGGAC CCCGAGGGGA TCGTGTGGAT TCGCGGTCTG
CTGCGGGGCC TGGCCGCCGA GGGCCGCGCG GTCCTGGTGT CCAGTCACCT GATGAGCGAG
CTGGAGGACG CCGCCGACCA TCTGCTCGTC GTGGGCCGGG GCCGGGTACT GGCCGACACT
CCGGTGTCGG CGCTGATCAC CGCCGCCTCC CGGGGCCGGA TCCTGGTGCG CACCACCGAA
CGCGAGGCCG TCATGGAGAT CCTGGCCGGT GACGGCGCCA CCGTCGCCGT CACCGGGACC
GACGTCGTCA CCGTCACGGG TCTGGCCGCC GCCCGGATCA CCGAACTGCT CAACGCCGCC
GCGATCCCCT TCTCGGAGGT GGCCACCTAC CGCGCCGGAC TCGAAACCGC CTATATGGAG
CTGACCCGCG AGGCGGTCGA GTTCCACGCC GAGCCGACGG AGGCCAAGCG ATGA
 
Protein sequence
MTARRREGAE DGSVSGRGER QRSLSLAAME TGIEVSEVHK RYGAVTALDG MTFTVKPGRV 
TGFVGPNGAG KSTTMRVILG LDTPQRGRAL VNGEPYRRLR HPLSQVGALL DASALQPGRS
ARNHLLWLAH SQGHGAKRVD AMLEQVGLSQ VGRRRAGGFS LGMRQRLGIA AALLCDPPVL
MLDEPFNGLD PEGIVWIRGL LRGLAAEGRA VLVSSHLMSE LEDAADHLLV VGRGRVLADT
PVSALITAAS RGRILVRTTE REAVMEILAG DGATVAVTGT DVVTVTGLAA ARITELLNAA
AIPFSEVATY RAGLETAYME LTREAVEFHA EPTEAKR