Gene Snas_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1898 
Symbol 
ID8883090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2014172 
End bp2014993 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content68% 
IMG OID 
ProductO-methyltransferase domain-containing protein 
Protein accessionYP_003510687 
Protein GI291299409 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0784201 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTCA TGGCTGACAC CGAACTCACC GGCGTGAAGC GGACCCTCGC GGTGGTGTTG 
CAGACCAAGG CCGTCGACAA CCTGCTGCCC GAGCCGATCC TGGGCGACGC ATACGCCGAG
CGGGCGATGC GGGGCCTGGA CCCCGACTAC GACAAACGTA AACGCGGGAC CAGCCAGATG
GGCGCGATGG CGGTCGTGCG GGCCAAGGCC CACGACGACT GGGCGCGTGC GTTCCTGGCC
GAACACCCCG ACGCGGTGGT GCTGCACCTG GGCTGCGGCC TGGACGCCCG GGTGTACCGC
GTCGACCCGC CCGCCGGGGT CGACTGGTAC GACCTGGACT TCCCCGACGT CATCGCACTG
CGGGAACAGC TACTGCCGCG AAGGGAGCAC TACACCCTCA TCGGTTCCAG CGTCATCGAG
CTCGCCTGGC TGGACCGGGT GCCCCACGAC CGTCCGGTGC TGATGATCGC CGAAGGGCTG
CTGCCGTACC TGGAGGCGGC CGACGTCGAA CGCATCGTCA CCTCCATCGT GGACGGATTC
CCGTCCGGGC AACTGCAGTG CGATCTCGTG CCGCCGTGGG TGTCGCGAAC CTCGAAGTAC
GACCCCAACC TGCGAAAGTA CGGCGTCACC TTCAAGTCGG GCTTCAAGCC GCGGGTGCTG
GCCGACTGGC ACCCGCGGCT CGAATACCTC GACGAGGCAC CGATCCTCAA CTCACCGGAC
CTGGCGCGAC TGCCCGCGTC GGTGCGGTTC ACGTACTGGC TGATGAACGT GACGCCGGGC
CTGCGCACCT CGTACCGGGT GGAGCGTTAC CGCTTCGGTT AG
 
Protein sequence
MEVMADTELT GVKRTLAVVL QTKAVDNLLP EPILGDAYAE RAMRGLDPDY DKRKRGTSQM 
GAMAVVRAKA HDDWARAFLA EHPDAVVLHL GCGLDARVYR VDPPAGVDWY DLDFPDVIAL
REQLLPRREH YTLIGSSVIE LAWLDRVPHD RPVLMIAEGL LPYLEAADVE RIVTSIVDGF
PSGQLQCDLV PPWVSRTSKY DPNLRKYGVT FKSGFKPRVL ADWHPRLEYL DEAPILNSPD
LARLPASVRF TYWLMNVTPG LRTSYRVERY RFG