Gene Snas_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1854 
Symbol 
ID8883045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1943872 
End bp1944615 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003510643 
Protein GI291299365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.156563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCG CGGCGGCGAC GCTCGCCTCC CCCGGCAGCC CCAACGACGA CACCTACATC 
GCGGGTCAGG GTTTCGCGGC GGTCCTGGAC GGAGCCACCG CGCCGAAGGA CCGCGACAGC
GGCTGCGTCC ACGACGTCCC GTGGCTGGTG GCCCGGCTGT CGGGGCACCT GGCGGCGCTG
TTGACCCACG AAGACCAGAC GCCGCTGCCG CGGCTGCTGG CCGCGACGAT CGAACGCACC
CGCGCCGACC ACGGCGACAC CTGCGATCTG TCCAATCCGG ACTCGCCGTC CAGTACCGTC
ACGGTGCTGC GCGAGGGACC CAACACGGTC GACTACCTGG TGCTGGGCGA CTCCCCACTG
GTGCTGCGCG GACCCGGCGA CACGGTTCAG GCCATTGTCG ACGATCGGGT CGAGCACCTG
CCCAGCTACA CCTACGAGGC GGTGGCGCGG CTGCGCAACA GCCCCGAGGG GTTCTGGGTG
GCCAGCACCG ACGTGGGCGC GGCCGGGCAC GCGCTGACCG GCAGCCTGCC GCGCGGCGAG
GTCACCCGGG CACTGCTGTT GACCGACGGC GCCTCCCGGC TGGCCGACCG CTACGGCCGC
GACTGGCCGG ACCTGCTGGT GACCGCCGAG AAGTCCGGCC CGCAGACGCT GCTCAACGAG
GTGCGCGCCG CCGACGCGAC CGCGCCCGCG TCGCGGGGCA AACGCTTCGA CGACGCCACC
GCGGTGTGGT GCCGGCTGGC CTGA
 
Protein sequence
MEIAAATLAS PGSPNDDTYI AGQGFAAVLD GATAPKDRDS GCVHDVPWLV ARLSGHLAAL 
LTHEDQTPLP RLLAATIERT RADHGDTCDL SNPDSPSSTV TVLREGPNTV DYLVLGDSPL
VLRGPGDTVQ AIVDDRVEHL PSYTYEAVAR LRNSPEGFWV ASTDVGAAGH ALTGSLPRGE
VTRALLLTDG ASRLADRYGR DWPDLLVTAE KSGPQTLLNE VRAADATAPA SRGKRFDDAT
AVWCRLA