Gene Snas_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1840 
Symbol 
ID8883031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1929030 
End bp1929998 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content67% 
IMG OID 
Productdaunorubicin resistance ABC transporter ATPase subunit 
Protein accessionYP_003510629 
Protein GI291299351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGACG CGATCATCGC TCGCGGCCTC GTGAAGACCT ACGGGTCGGT CAAGGCCGTC 
GACGATCTGG ATGTGGTGGT TCCCGAGGGG ACCGTCATGG GGCTCCTGGG GCCCAACGGT
GCCGGGAAGA CCACCACGGT GCGCATGCTC ACCACGCTCA TCGCGCCCAA TGAGGGCGAG
ATAACCATCA AGGGCATCGA CGTGGTGGCC AAACCCAACA AGGTCCGCGA GATCATCGGG
GTGTCGGGGC AGTATGCCGC CGTCGACGAG AACCTCACCG GTTACGAGAA CCTGGAGATG
GTGGGGCGGC TCTACCACCT GGGCAAGGCC AAGGCCCGCA AACGGGCCCA CGAACTGCTG
GAGCGTTTCG ACCTGACCGA GGCGGCCAAC CGTCCGTCCA AGACGTACTC GGGCGGTATG
CGGCGGCGGC TCGACCTGGC CGGTGCCCTG GTCGCCGCTC CCCCGGTGCT GTTCCTGGAC
GAGCCGACCA CGGGGCTGGA CCCGCGCAGC CGGGTCGGCA TGTGGGACGT CATCAACGAG
CTGGTGGCCG AGGGCACCAC GCTGCTGCTG ACCACCCAGT ACCTGGAGGA GGCCGACGAG
CTGGCCGAGG ACATCATCGT CATCGACCAC GGCAAGGCCA TCGCGCACGG CACTCCGGAC
CAGCTGAAGC GCCAGATCGG CGGGGAGCGG CTGGAGATCA CGCTGCACTC CAAGGCCGAC
GCCTCGGCGG TGGTGCAGAC CGTCGACGCG CTGGGCATGT CGGGTTACAC CGTCGACGAC
GAGACCCACA AGATCTCGAT CCCGGTCACC GACGGCACCG AGGCGCTGTT CGAGGCGGTG
CGGCGGTTGG ACGAGGCGTC GGTGAAGCCC GCCGACATCG GCATCCACCG ACCCACGCTC
GACGACGTGT TCATGCGACT GACCGGCCAC GCCGCCGAAG AGTCCGAGGA CGAGGAGACC
AAGGCATGA
 
Protein sequence
MTDAIIARGL VKTYGSVKAV DDLDVVVPEG TVMGLLGPNG AGKTTTVRML TTLIAPNEGE 
ITIKGIDVVA KPNKVREIIG VSGQYAAVDE NLTGYENLEM VGRLYHLGKA KARKRAHELL
ERFDLTEAAN RPSKTYSGGM RRRLDLAGAL VAAPPVLFLD EPTTGLDPRS RVGMWDVINE
LVAEGTTLLL TTQYLEEADE LAEDIIVIDH GKAIAHGTPD QLKRQIGGER LEITLHSKAD
ASAVVQTVDA LGMSGYTVDD ETHKISIPVT DGTEALFEAV RRLDEASVKP ADIGIHRPTL
DDVFMRLTGH AAEESEDEET KA