Gene Snas_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1839 
Symbol 
ID8883030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1928156 
End bp1928956 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003510628 
Protein GI291299350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC TCGTAGACGG CTGGGTCGTC GCCAAGCGCA ACCTCATCAA GATCAAGCGC 
GTCCCGGACC TGCTGATCTT CTCCACCATC CAGCCGATCA TGTTCGTGCT GCTGTTCGCC
TACGTGTTCG GCAGCGCCAT CAAGGTGCCC GGCACCAACG ACCCGGCCGC GTACCGGGAG
TTCCTGATGG CGGGCATCTT CACCCAGACC GTCGCCTTCG GTTCCTCGCT GACCGGCATG
GGGCTGGCCG AGGACATGAC CAAGGGAATC ATCGACCGGT TCCGGTCGCT GCCGATGTCG
CGGGCCGCGG TCCTGATCGG ACGTACCACC TCCGACCTGC TCAACAACGT GCTGGTCGTG
GCGGTCATGG TCGCCTGCGG CCTTCTGGTC GGCTGGCGCA CCCACACCAA CGTCCTCGAC
GTGGTGGCCG GTTTCGGGCT GCTGTTCCTG TTCGGGTACG CGATGAGCTG GATCTCGGCC
ACGATCGGCC TGTCGGTCAA GAGCGTGGAG GTGGCGCAGT CGGCCGGGTT CATCTGGATG
TTCCCGCTGA CGTTCCTGTC CAACGCGTTC GTGCCCACCG AGGGGATGCC CACGGTGCTG
CGGACCATCG CCGACTGGAA CCCGGTCTCG GCGATCGTGC TGGCACTGCG GCAGCTGTGG
GGCAACCCGG GGGTCGAGCC GACCGGTTCG GGCTTCCCGG TGGAACGTCC GGGGCTGTAC
TCGCTGCTGA CGATCGTGGC GATCCTGGTG ATCTTCGTGC CGCTGTCGAT CCGCGCCTAC
CGCCGCGCCG CCAGCCGCTA G
 
Protein sequence
MTALVDGWVV AKRNLIKIKR VPDLLIFSTI QPIMFVLLFA YVFGSAIKVP GTNDPAAYRE 
FLMAGIFTQT VAFGSSLTGM GLAEDMTKGI IDRFRSLPMS RAAVLIGRTT SDLLNNVLVV
AVMVACGLLV GWRTHTNVLD VVAGFGLLFL FGYAMSWISA TIGLSVKSVE VAQSAGFIWM
FPLTFLSNAF VPTEGMPTVL RTIADWNPVS AIVLALRQLW GNPGVEPTGS GFPVERPGLY
SLLTIVAILV IFVPLSIRAY RRAASR