Gene Snas_1815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1815 
Symbol 
ID8883006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1903721 
End bp1904920 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content71% 
IMG OID 
ProductD-serine deaminase 
Protein accessionYP_003510604 
Protein GI291299326 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC TGGAATCCCT GTACACCGAA CGGCTCGACT GGCGGTTCAA GGCCGTGCCC 
GCGGCGGCGG AGGGCCTGCG GCTGCGTGAC TGGCTGAGCC ACCGCCCGCA CGTCAGCAAG
CTCGAGACTC CATTGATGAC ACTGGACGCG GACGCCGTGG CGCACAACAT CTCCGCCATG
GCGCACTGGT GCGACGCCAA CCGGCTGGCG CACGCGCCGC ACGGCAAGAC CACCATGGCC
CCGGCGCTGT GGGACCAGCA GTTGCGGGCC GGAGCCTGGG CGATCACACT GGCCAACGTG
CCGCAGCTGC GGGTGGCGCG CGCCTTCGGG GTCCCGCGCG TCATCGTGGC CAACGAACTG
GTGTCGCGCG GTTCGCTGCA GTGGCTGGCG GCCTGGGCCG CCGAGGGCGC GACGATCCTG
TGCTTCGTCG ACTCGGTGGC GGCGGTGTCC CTCATGGACG ATGCGTTGCG GCACGGCGAC
GACAGCCTCG ACGTGGTCGT CGAACTGGGT GGCTACGGCG GCCGGGCCGG GGCGCGCGAC
TTCGATTCGG CCCGCAAGGT CGCCGCCGCG GTGCGCTCGG CCCGGCGGCT GCGGCTGGCC
GGAGTGGGCG GTTACGAGGG CGCCATCGCG CACACCGACT CCACCACGGA CCTACAGCGG
GTCGACGAGT TCCTGCGGGG GCTGCGGGAT CTGCACGAGA GCCTGCGCTA CGAGACCGAC
GAGCCGGTGG TGACCGTCGG CGGCAGCCAG TACTACGACC AGATCGCCGA GCACCTGAGC
GACCTGTCGA GCGCCCGGGT GGTGCTGCGG GCGGGGTCCT ATGTCACCCA TGACGACGGC
CTGTACTCGC GACTGGTGCC CGCCGCCCGG GGCCGCTCCG GTCCGGCGCT GCGCGCCGCG
TTGCGCGCCT ATGTCACCGT CCTGTCCAAA CCGGAGCAGT CGTTGGCCAT TCTGGACGCG
GGCCGCCGCG ACCTGTCCTT CGACGCCGGT TGGCCGGTGC CGTTGGGCAT GCCCGGGGCC
AAGGTCACCG AACTCAACGA CCAGCACGGG TATCTGCGCG GTGATCTGTC CGGAGTGGAG
GTCGGCGACA TCCTGCGGCT GGGCATCTCG CACCCGTGCA CCAGTTTCGA CAAGTGGAAT
CTGATCCCGG TCCTGGACGC CGAGGGCTTC GTCGTGGACG CGGTCCGCAC CTTCTTCTAG
 
Protein sequence
MLDLESLYTE RLDWRFKAVP AAAEGLRLRD WLSHRPHVSK LETPLMTLDA DAVAHNISAM 
AHWCDANRLA HAPHGKTTMA PALWDQQLRA GAWAITLANV PQLRVARAFG VPRVIVANEL
VSRGSLQWLA AWAAEGATIL CFVDSVAAVS LMDDALRHGD DSLDVVVELG GYGGRAGARD
FDSARKVAAA VRSARRLRLA GVGGYEGAIA HTDSTTDLQR VDEFLRGLRD LHESLRYETD
EPVVTVGGSQ YYDQIAEHLS DLSSARVVLR AGSYVTHDDG LYSRLVPAAR GRSGPALRAA
LRAYVTVLSK PEQSLAILDA GRRDLSFDAG WPVPLGMPGA KVTELNDQHG YLRGDLSGVE
VGDILRLGIS HPCTSFDKWN LIPVLDAEGF VVDAVRTFF