Gene Snas_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_1799 
Symbol 
ID8882989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp1889657 
End bp1891507 
Gene Length1851 bp 
Protein Length616 aa 
Translation table11 
GC content70% 
IMG OID 
ProductDNA primase 
Protein accessionYP_003510588 
Protein GI291299310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGAC GGATACGTGG CGAGGATGTC GCACTGGTGC GCGAACGCAC CGACATCGCC 
GAGGTGATCG GCGAACACGT CACGCTCAAA CCGGCCGGGG GCGGCAACCT CAAGGGGCTG
TGCCCGTTCC ACGACGAACG CACCCCCAGC TTCAACGTCA CCCCGTCCAA GGGTTTCTTC
CACTGCTTCG GCTGCGGCGC CGGCGGCGAC GCCATCAGCT TCCTCACCGA ACTCGAACAC
CTCAGCTTCG CCGAGGCCGT CGAACGGCTC GCCTCCAAAG CCGGGGTGAC CCTGCACTAC
GAGGACACCG ACGGCCGCTC CTCGTCCCGC TCGCAACAGC CGGGCCGCAA ACAGCGACTC
CTGGCCGCCC ACACCGAGGC CGCGAAGTTC TACAGTGAAC AGCTCGCCTC GCCCGAGGCC
CGCATCGCCC GCGACTTCCT GTCCGAACGC GGCTTCGACC GCGACGCCGC CGAAAGCTTC
GGCTGCGGCT TCGCGCCACC CGGCTGGGAC GCGCTCACCA AACACCTGCG CGGCCGCGGC
TTCACCCCCG ACGAACTCAC CGAGGGCGGG CTGGCCAAAC CGGCACGCTC CGGCTCCCTC
ATCGACCGGT TCCGGGGACG ACTGGTGTGG CCGATCCACG ACCTGACCGG CGGCATCATC
GGCTTCGGCG CCCGCCGACT GTCCGAAGAC GACAACGGCC CGAAATACCT CAACACCCCC
GAGACGCCGC TGTACAAGAA ATCGCAGGTC CTGTACGGCA TCGACGCCGC CAAACGCGAG
ATCGCCAAAC GGCGCCAGGT CGTGGTCGTG GAGGGCTACA CCGACGTCAT GGCCTGCCAC
CTCGCCGGAG TGCCCACCGC CGTGGCCACC TGCGGCACCG CCTTCGGCAG CGACCACATC
AACGTGCTGC GGCGCCTGCT GATGGACTCC GACGAGTTCA AGGGCGAGGT CATCTTCACC
TTCGACGGCG ACGAGGCCGG ACAGAAGGCC GCGCTGAAGG CCTTCGGCGA CGAACAGCGC
TTCGTCGCCC AGACCTACAT CGCGGTGTCC CCCGGCGGCA TGGACCCGTG CGAACTGCGC
ATGGCACAGG GCGACGAGGC GGTTCGTGAG CTCGTCGCCG GACGCGAACA CCTCGTCGAC
TTCGCCATCG CCACCACCCT GGCCTCCTAC GACCTCGACA GCGTCGAGGG CCGGGTGGCC
GCGCTGCGCG CCACCGCGCC ACTGGTGGCC CGCATCAAGG ACAAGTCCCT GCACCCCGGG
TACACGCAGC GGCTGGCCGG ACGACTCGGC GAGGACGTCG ACCTGGTGCG CCGCTGGGTG
CACGCCGCCC GCAGCAAACA GGCCCCGCCG CAGGCGGGAC CGGCCCGCCG CAAGGTCACC
GGCCCCCGGC TGCTGTCCGA ACGCGACGTG CTGAAACTGG CCGTCCAGCA CCCCGAGATG
GCCGGACCGT ACTTCGACGA GGTCGACGAG ACCTACTTCT CCGACCCGAT GCACGTCGTG
GTGCGCCGCG CCATCGCCAA CGCCGGGGGC GCGGCAGCCG CCGCGTCCGG CCCCAACTGG
GGTATGGCGA TCTCCGACGC CTGCGGCGAC CTGGCCGCCG CCGCCCTGGT CGCCGAACTG
GCGGTCGAAC CGCTGCGCAT CGACGGCGAA CCCGACACCC GCTACGTCGC CACCGCGCTG
GCCGGGGTGC AGTGGCCGGT CGTGGAGGAA CAGGTCGCCG AACTCAAGTC CAAGTTGCAG
CGCATGAACC CCGAGACCGA CTCCGAGGGC TACATGAAAC TGTTCGGCGA GCTGATGGCG
CTGGAACAGC GGCTGCGCGG ACTCAAGGAA CGCGCCGCCG GAGCCCTGTG A
 
Protein sequence
MAGRIRGEDV ALVRERTDIA EVIGEHVTLK PAGGGNLKGL CPFHDERTPS FNVTPSKGFF 
HCFGCGAGGD AISFLTELEH LSFAEAVERL ASKAGVTLHY EDTDGRSSSR SQQPGRKQRL
LAAHTEAAKF YSEQLASPEA RIARDFLSER GFDRDAAESF GCGFAPPGWD ALTKHLRGRG
FTPDELTEGG LAKPARSGSL IDRFRGRLVW PIHDLTGGII GFGARRLSED DNGPKYLNTP
ETPLYKKSQV LYGIDAAKRE IAKRRQVVVV EGYTDVMACH LAGVPTAVAT CGTAFGSDHI
NVLRRLLMDS DEFKGEVIFT FDGDEAGQKA ALKAFGDEQR FVAQTYIAVS PGGMDPCELR
MAQGDEAVRE LVAGREHLVD FAIATTLASY DLDSVEGRVA ALRATAPLVA RIKDKSLHPG
YTQRLAGRLG EDVDLVRRWV HAARSKQAPP QAGPARRKVT GPRLLSERDV LKLAVQHPEM
AGPYFDEVDE TYFSDPMHVV VRRAIANAGG AAAAASGPNW GMAISDACGD LAAAALVAEL
AVEPLRIDGE PDTRYVATAL AGVQWPVVEE QVAELKSKLQ RMNPETDSEG YMKLFGELMA
LEQRLRGLKE RAAGAL